Phocoena sinus (vaquita): 116756941
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Entry
116756941 CDS
T07759
Symbol
GTF3C3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116756941 (GTF3C3)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
116756941 (GTF3C3)
TFIIIC, fungi type
116756941 (GTF3C3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_1
TPR_19
TPR_16
ANAPC3
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_15
TPR_9
ARM_TT21
TPR_EMC2
HAT_Syf1_CNRKL1_C
TPR_Vps41
SHNi-TPR
TPR_4
Motif
Other DBs
NCBI-GeneID:
116756941
NCBI-ProteinID:
XP_032493979
Ensembl:
ENSPSNG00000002123
LinkDB
All DBs
Position
7:38754621..38785720
Genome browser
AA seq
893 aa
AA seq
DB search
MSGFSPELIDYLEGKISFEEFERRREERKTREKKSLQEKGKPSAEENPNDSAVPSSSGID
STKSQEEDVNEGETSDGVSKSVHKVFASMLGENEDEDEEEDEEEDEEEETPEQPTAGDVF
VLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLA
YEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTK
ALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLSRDMAKSYYE
ANDVISAINIIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVITDFSGIVLEKKTT
EEGTSEENKSCSFLCIGESGENVSCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLV
EQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYME
RAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQEL
KLLLQRSTLLFSQGKMYGYVDTLLTMLAMLLRVAMNRAQVCLISSSKSGERHLYLIKVSR
DKISDNNDQESANCDAKAIFAVLTSVLTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSL
EYYSFYEDRPKRKELEYFGLSAAILDKNFRKAYNYIRIMVMENVNKPQLWNIFNQVTMHS
QDVRHHRFCLRLMLKNPDNHALCVLNGHNAFVSGSFKHALGQYVQAFRSHPHEPLYSLCI
GLTFIHMASQKYVLKRHALIVQGFSFLNRYLSLRGPCQESFYNLGRGLHQLGLIHLAIHY
YQKALELPPFMVEGMEVDQLDLRRDIAYNLSLIYQNSGNIGMAQKLLYTYCSI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggttcagcccggagctcatcgactatctggaagggaagatctcctttgaggag
ttcgaaaggcggagagaagagagaaaaacccgtgagaagaaaagtcttcaggaaaaaggc
aagccatcagctgaagaaaatccaaatgactctgcagttccatcatcatcaggaattgac
tctaccaaatctcaggaggaagatgtcaatgaaggagaaacatcagatggagtcagtaag
tcagttcacaaggtctttgcttccatgcttggagagaatgaagatgaggacgaggaggag
gacgaggaggaggacgaggaggaggagacacctgagcaacccactgcaggcgacgtgttt
gtattagagatggttctcaatcgtgaaaccaagaaaatgatgaaagagaaaaggcctcgg
agtaaacttcccagagctctgagaggtctcatgggtgaagccaacattcgctttgctcga
ggagaacgtgaagaggcgatattgatgtgcatggaaatcataagacaagctcctttggct
tatgagccattttctactcttgctatgatatatgaggaccaaggtgacatggagaaatca
ctgcagtttgagttgattgctgcacatttaaatcccagtgacactgaagaatgggttaga
ttggcagaaatgtccctggaacaagacaatattaagcaggctattttttgctacacaaaa
gcacttaaatatgaacctactaatgtccgttatctgtgggagcgatcaagcctttatgaa
cagatgggagatcacaaaatggcaatggatggttataggcgtattttaaaccttttgtct
ccgtctgatggagaacgatttatgcagttgtccagagatatggcaaagagttactatgaa
gccaatgatgttatttcagctattaacataattgaagaagctttctcaaagcaccagggc
ctagtctccatggaagatgttaacattgcagctgaactatacatttctaataaacaatat
gacaaagctttggaggtaattacagatttttctggaattgtgctagaaaaaaaaactaca
gaagaaggcacttcagaagagaataaaagttgtagtttcctctgcataggagagtctggt
gagaatgtttcctgtactataccagatggtgtgccaatagatatcacagtgaagttgatg
gtctgccttgtacatctcaacatccttgaaccacttaatcctctcttgacaacactcgtg
gaacagaatcccgaagacatgggagacctctatctcgatgttgctgaagcttttctggat
gttggtgaatataattctgcacttcccctccttagtgcgctagtctgctctgaaagatat
aacctcgcagtggtttggcttcggcatgcagaatgcttaaaggccttaggctatatggag
cgtgctgccgaaagctacggcaaagtggttgatctggcccccctccatttggatgcaaga
atttcactttccacccttcagcagcagctgggccgtcctgagaaagctctggaagctctg
gaaccaatgtatgatccagatactttagcacaagatgcaaatgcagcacagcaggaactg
aagttgctgcttcaacgttctactctattgttttcacaaggcaaaatgtatggttatgtg
gataccttgcttaccatgttagccatgcttttaagggtagcaatgaatagagcccaagtc
tgtttgatatctagttccaaatctggagagaggcatctctaccttattaaagtgtcaaga
gacaaaatatcagacaacaatgaccaagagtcagcaaattgtgatgcaaaagcaatattt
gctgtactcacgagtgttttgacaaaagatgactggtggaaccttcttttgaaggccata
tactccttatgtgacctatcccgatttcaggaggctgagttacttgtggattcttcattg
gaatattactcattttatgaggacaggccaaaacgcaaagagctagaatactttggtctc
tctgctgcaattctggacaaaaatttcagaaaggcatataactatatcaggataatggta
atggaaaatgtcaataaaccccagctctggaacattttcaatcaagttaccatgcattcc
caagatgtacgacatcaccgcttttgtctccgtttaatgctgaaaaacccagataatcat
gccctgtgtgtcttgaatggacacaatgcattcgtatctggtagttttaagcatgcactt
ggacagtatgtgcaggcctttcgcagccatccccatgaacctctctacagcctctgtata
ggcctaacctttattcacatggcatctcagaagtatgtattaaagaggcatgctcttatt
gtgcagggcttttcctttcttaatcgatacctcagtctacgtgggccttgccaggaatca
ttctacaatttgggccgtggccttcaccaactggggctgattcaccttgcaatccactat
tatcagaaggccctggagctccctccattcatggtagagggtatggaagttgaccagtta
gacttacgaagagatattgcctacaatttgtctctcatatatcagaacagtgggaatatt
ggaatggctcagaagcttttatatacttattgttctatataa
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