Phocoena sinus (vaquita): 116757043
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Entry
116757043 CDS
T07759
Symbol
DTL
Name
(RefSeq) denticleless protein homolog isoform X1
KO
K11790
denticleless
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116757043 (DTL)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116757043 (DTL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_SCAP
WDR54
Motif
Other DBs
NCBI-GeneID:
116757043
NCBI-ProteinID:
XP_032494209
Ensembl:
ENSPSNG00000010167
LinkDB
All DBs
Position
1:complement(145982231..146022448)
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AA seq
762 aa
AA seq
DB search
MLFNSVLRQPQFGVPRNGWSSQYPLQSLLTGYQCNYNDEHTSYGETGAPVPPFGCTFSSA
PNMEHILAVANEEGFVRLYNTESQTSRKKCVKEWMAHWNAVFDLAWVPGELKLVTAAGDQ
TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR
QVNQISGAHNTLDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGVI
KIWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM
TGLKTSPVAIFNGHQNSTFYVKSSISPDDQFLVSGSSDEAAYIWKVSIPWHPPTVLLGHS
QEVTSVCWCPSDFTKIATCSDDNTLKVWRLNRDLEEKSGGDKLSVVGWASQKKREARADL
VTVTSSQSTPAKAPRVKSSPCISSPSSAACAPSCAGDLPLPSNTATFSLKTPPAKTRSPI
SRRGSMSSVSPKPPSSFKMSIRNWMTRTPSLSPPMTPPASETKITSPRKALIPVSLKSSQ
AVTCSESRNRVKRRLDSSCLENVKQKCVKSCNCVTELDDPVEKLHLDLCCLAGNQEDLGK
DSLGPTKPSKIEGTSMSVTEPPSPASPYASEGCGTLPLPLGSCGEGSEVVGKENSSPENK
NWLLAMAAKRKAENSSPRSPSSQTPNPRRQSGKTSPGPIISKTDIAGRNSFVNLENQVTH
GGGRSSCEHWVTITPSSMRKICTYFHRKSQDGYCSPEQSTEL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcaattcggtactccgccagccccagtttggcgtcccgagaaatggatggtct
tcacaataccctctacagtcccttcttactggttatcagtgcaactataatgatgagcac
acttcttatggagaaacaggagccccagttcctccttttggatgcaccttctcttctgct
cccaatatggagcatatactagcagttgccaatgaagaaggcttcgttaggttatataac
acagaatcacaaaccagtagaaagaagtgcgtcaaagaatggatggctcactggaatgct
gtctttgacctggcctgggtccctggtgaacttaagcttgttacagcagcaggtgatcaa
acagccaaattttgggatgtaaaagctggtgagctgattggaacatgcaaaggtcatcag
tgcagcctaaagtcagttgccttttctaagtttgagaaagctgtcttctgtacaggtgga
agagatggcaacattatggtctgggacaccaggtgcaacaaaaaagatggattttatagg
caagtgaatcaaatcagtggagctcacaataccttagacaagcaaaccccttcaaaacct
aagaagaaacagaattcaaaagggcttgctccttctgtggatttccagcagagtgttact
gtggtcctctttcaagatgagaatacattagtctcagcaggagccgtggatggggtaatc
aaaatatgggatttacgtaagaattatactgcttatcggcaagaacccatagcatccaag
tctttcctgtacccaggtagcagcactcgaaaactaggatactcaagtctgattttggat
tctactggctctactttatttgctaactgcacagatgacaacatctacatgttcaatatg
actggattaaagacttctccagtggctatcttcaatggacatcagaactctaccttttat
gttaagtccagtattagtccagatgaccagtttttagtcagtggctcaagtgatgaagct
gcctacatctggaaggtctccataccttggcatcctcctactgtgctcctgggtcattct
caagaggtcacatctgtgtgctggtgtccatcagacttcacaaagattgctacctgctct
gatgacaatacactgaaagtctggcgcttgaatagagacttagaagagaaatcaggagga
gataaactctccgtagtgggctgggcctctcagaagaagagagaggcgagagccgaccta
gtaacagtgacaagtagccagagtactcctgccaaagcccccagagtaaagagcagtcca
tgcatttcctccccatcatcagcagcttgtgctccaagctgtgctggagacctccctctt
ccttcaaatactgccacattctctcttaaaacccctcctgccaagacccgatctcccatc
agcagaagaggctccatgtcctctgtctctcccaagccaccctcatctttcaagatgtcc
attaggaactggatgacccggacaccttccttatcaccacccatgactccacctgcttct
gagaccaagatcacgtctccaagaaaagcccttatacctgtgagcctgaaatcatcccaa
gcagtgacttgctctgagtctagaaatagagtaaagaggaggctagactcaagttgtctg
gagaatgtgaaacaaaagtgtgtaaagagttgcaactgtgtgactgagcttgatgaccca
gttgaaaaacttcatttggatctgtgctgccttgctggtaaccaggaagaccttggtaag
gactctctaggtcctaccaaaccaagcaagattgaagggactagtatgagtgtcacagag
cctccttctcctgccagtccttatgcttcagaaggctgtggaacgctacctcttcctttg
ggatcttgtggagaaggctctgaagtggtaggcaaagagaatagctccccagagaataaa
aactggttattggccatggcagccaaacggaaggctgagaattcgtctccacgaagtcca
tcatcccagacccccaaccctaggaggcagagtggaaagacttctccaggcccgataatt
tcaaaaacagatattgctggcagaaatagctttgtgaaccttgaaaaccaagtgactcat
ggtggaggcagaagtagctgtgagcattgggtcaccattactcccagctccatgcggaaa
atctgtacatatttccatagaaagtcccaagatggctactgtagtccagaacagtcaaca
gaattatag
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