KEGG   Phocoena sinus (vaquita): 116757052
Entry
116757052         CDS       T07759                                 
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X1
  KO
K16337  syndecan 3
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04514  Cell adhesion molecules
psiu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116757052 (SDC3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116757052 (SDC3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:psiu00535]
    116757052 (SDC3)
Proteoglycans [BR:psiu00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   116757052 (SDC3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 116757052
NCBI-ProteinID: XP_032494244
Ensembl: ENSPSNG00000007871
UniProt: A0A8C9BLP2
LinkDB
Position
1:complement(24582540..24620567)
AA seq 442 aa
MKPGPPHRAGAAHGAGAGAGAAAGPGARGLLLPPLLLLLLAGRAAGAQRWRSENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIETAMRFSPDVDLAVSTTPVVLPTMDIQ
PVGTPFEELPSERPTPGPATSPPLVTEVPEEPSQRATTISTPTATTAATTTGTPAVATVP
ATVATAAPSIPAAPPSTATTSIVRTTGIRRLLPLPLTTAATARATTPAVPSPPTTVAVLD
TEAPTPRLVNTATSRPRTLPRPATTQEPDIPEKSTLPLGTTAPGPTEVAQTPTPEFFLTT
IRDEPEVPVSGGPSGDFELPEEETTQPDTANEVVAVGGAAAKPSPPPGTLPKGARPGPGL
LDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaagcccggtccgccgcaccgcgccggggccgcccacggggctggcgctggggccggg
gccgcggccgggccaggggcccgcgggctgcttctgccgccgctgctgctgctgctgctg
gcggggcgcgccgcgggggctcagcgctggcgcagtgagaacttcgagaggcccgtggac
ctcgagggctctggggacgatgactccttccccgatgatgagctggatgacctctactcc
gggtcgggctcgggctacttcgagcaggagtcgggcatcgagacagccatgcggttcagc
ccagatgtggacctggcagtgtccaccacacccgtggtgctgcccaccatggacatccag
cctgtgggcaccccgtttgaagagctcccttctgagcgccccaccccagggccagccacc
agccccccattggtgacagaggtcccagaagagcccagccagagagccactaccatctcc
actcctacggcaaccactgctgccacaaccacagggaccccagctgtggccacagtgccc
gccacagtggccaccgccgcccccagcatccctgcagcacctccttccacggccaccacc
tccatcgtaaggaccaccggcatacggaggcttctgcctcttccactgaccacagcagcc
acagcccgggccaccaccccagcggtaccctcacctcccaccacagtggctgtcttggac
acagaggccccaacacccaggctggtcaacacagctacctccagaccaaggacccttccc
aggccagctaccacccaggagcctgacatccctgagaagagcaccctgcccctggggacc
actgcccctggacccacggaggtggctcagaccccaactccagagttcttcctcaccacg
atccgggatgagccagaggtgccagtgagtgggggacccagtggggactttgagctgccg
gaggaagagaccacacagccagacacagccaatgaggtggtggctgtgggtggggccgcg
gccaagccgtcacctccacctgggacgctgcccaagggtgcccgcccaggccctggcctc
ctggacaatgccatcgactcgggcagctcggcggctcagctgccacagaagagcatcctg
gagcggaaggaagtgctcgtagctgtgattgtgggcggggtggtgggcgccctctttgcc
gccttcctggtcacactgctcatctaccgcatgaagaagaaggacgagggcagctacacg
ctggaggagcccaaacaggcgagcgtcacataccagaagcccgacaagcaagaggagttc
tacgcctag

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