Phocoena sinus (vaquita): 116757199
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Entry
116757199 CDS
T07759
Symbol
LMNA
Name
(RefSeq) lamin isoform X1
KO
K12641
lamin A/C
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04210
Apoptosis
psiu04820
Cytoskeleton in muscle cells
psiu05410
Hypertrophic cardiomyopathy
psiu05412
Arrhythmogenic right ventricular cardiomyopathy
psiu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116757199 (LMNA)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116757199 (LMNA)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
116757199 (LMNA)
05412 Arrhythmogenic right ventricular cardiomyopathy
116757199 (LMNA)
05414 Dilated cardiomyopathy
116757199 (LMNA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116757199 (LMNA)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
116757199 (LMNA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
HAUS-augmin3
TolA_bind_tri
ACBP4_C
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
116757199
NCBI-ProteinID:
XP_032494573
Ensembl:
ENSPSNG00000001902
UniProt:
A0A8C9DWU3
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Position
1:114470174..114489388
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AA seq
664 aa
AA seq
DB search
METPSQRRATRGGAQGSSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLR
LRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKDLKARN
TKKEGDLMAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALSEAK
KQLQDEMLRRVDAENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESR
LADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLMGAAHEELQQSRVRID
SLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQ
ELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRGRASSHSSQTQSGGSITKKRK
LESTESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLT
YRFPPKFTLKAGQVVTIWAAGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAM
RKLVRSVTMVEDDEDEDGDDLLHHHHGSHGSSSGDPAEYNLRSRTVLCGTCGQPADKASA
SSSAAQVGGSISSGSSASSVAVTRSYRGVGGSGGGSFGDSLVTRSYLLGNSRLRTQSPQN
CSIM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccgtcccagcggcgcgccacccgcggtggggcgcagggcagctccaccccg
ctgtcgcccacccgcatcacccggctgcaggagaaggaggacctgcaggagctcaatgac
cgcttggcggtctacatcgaccgtgtgcgctcgctggagacggagaacgcaggtctgcgc
cttcgcatcaccgagtccgaggaggtggtcagccgcgaggtgtccggcatcaaggccgcc
tacgaggcagagctcggggatgcccgcaagaccctcgactcggtggccaaggagcgcgcc
cgcctgcagctggagctgagcaaagtgcgcgaggagttcaaggacctcaaggcacgcaat
accaagaaggagggagacttgatggctgcccaggcccggctcaaggacctggaggctctg
ctcaactccaaggaggccgcactgagcactgctctcagtgagaaacgcacgctggagggc
gagctgcatgacctgcgggggcaagtggccaagctcgaggcagccctgagtgaggccaag
aagcaacttcaggatgagatgctgcggcgggtagatgctgagaacaggctgcagaccctg
aaggaggagctggacttccagaagaacatctacagcgaggagcttcgtgagaccaagcgc
cgccatgagacgcgactggtggagattgataatgggaagcagcgtgagtttgagagccgg
ctggcggatgccctgcaggagctgcgggcccagcacgaggaccaggtggaacagtacaag
aaggaactggagaagacctattctgccaagctggataatgccaggcagtcagccgagagg
aacagcaacctgatgggggccgcccacgaggagctgcagcagtcccgcgtccgcatcgac
agcctctctgcccagctcagccagctccagaagcagctggcagccaaggaagcaaagctg
agggacctggaggactcgctggcccgtgagcgggacaccagccggcggctgctggcagac
aaggagcgggagatggcggaaatgcgggcaaggatgcaacagcagttggacgagtaccag
gagctgctggacatcaagctggccctggacatggagatccacgcctaccgcaagctcctg
gagggcgaggaggagaggctacgcctttcccccagccccacctcacagcgcagccgcggc
cgggcctcctcccactcgtcccagacacagagtgggggcagcatcaccaaaaagcgcaag
ctggagtccacagagagccgcagcagcttctcccagcacgctcgcaccagcgggcgcgtg
gccgtggaggaggtggacgaggagggcaagttcgtacgcctgcgcaacaagtcaaatgag
gaccagtccatgggcaactggcagatcaagcgccagaatggagatgatcccctactgacc
taccgcttcccgccaaagttcactctgaaggctggtcaggtggtgacgatctgggctgca
ggagctggggccacccacagcccccctaccgacttggtgtggaaggcacagaacacctgg
ggctgtggaaacagcctgcgcacggctctcatcaactccactggggaagaggtggccatg
cgcaagctggtgcgctcagtgactatggttgaggatgacgaagatgaggatggagatgac
ctgctccatcaccaccacggctcccacggcagcagctcgggggaccccgccgagtacaac
ctgcgctcgcgcaccgtgctgtgcgggacgtgcgggcagcctgcagacaaggcgtctgcc
agcagctcggcagcccaggtgggcggatccatctcctctggctcctccgcctccagtgtc
gcagtcactcgcagctaccgcggtgtggggggcagtgggggtggcagcttcggggacagc
ctggtcacccgctcctacctcctgggcaactccagactccgaacccagagcccccagaac
tgcagcatcatgtaa
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