Phocoena sinus (vaquita): 116757333
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Entry
116757333 CDS
T07759
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04136
Autophagy - other
psiu04140
Autophagy - animal
psiu04211
Longevity regulating pathway
psiu05010
Alzheimer disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116757333 (ATG13)
04136 Autophagy - other
116757333 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
116757333 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116757333 (ATG13)
05014 Amyotrophic lateral sclerosis
116757333 (ATG13)
05016 Huntington disease
116757333 (ATG13)
05017 Spinocerebellar ataxia
116757333 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
116757333 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116757333 (ATG13)
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116757333 (ATG13)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
116757333 (ATG13)
Atg1 complex
116757333 (ATG13)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116757333 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
116757333
NCBI-ProteinID:
XP_032494624
Ensembl:
ENSPSNG00000005490
LinkDB
All DBs
Position
8:96735487..96786380
Genome browser
AA seq
518 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAIGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
TYPSVEDSQEVCTTSFSTSPPSQLSSSRLSCQPAALGVGSADLGCPAVFAAGLNTTHPYQ
LMVPGKEGGVPLAPNQPAHGAQAGDQERLTTYTPSDGAHCAATPSSSEDTETVSNSSEGR
ASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAAKNLELEDVDPMVNPPDSPET
TSPLQGSLHSDGSSGGSSGNTQDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSL
SIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggcgagaagatttgtactcgt
tcatcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggcgctggcagggcagctgcctgccatcgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgccgtgtacaacaga
ctgtcgttgctactgaagtctctccttgctataactagggtgacaccagcttacagactg
tccaggaaacaagggcatgaatatgtcatattgtatagaatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtgggtacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcatccctgcaattacagaaccgctggtgaggacactggagta
acatatccttctgtggaagattctcaagaagtgtgcaccacctctttttccacctcccct
ccatcccagctctcaagctctcgcctttcctgtcagcctgctgccctgggcgttggatca
gctgacctgggttgtccagccgtgtttgctgccggcttaaacaccacacacccttaccag
ctaatggttcccgggaaggaaggtggggtaccccttgctcccaaccagcctgcccacggt
gcccaggctggtgaccaggagagactgacaacctacaccccttctgatggggcccactgt
gctgccacaccttccagcagtgaggatactgaaactgtgtcaaacagcagtgagggacgg
gcctccccccatgatgtcttggagaccatctttgtccggaaagtgggggcttttgtcaac
aaacccatcaaccaggtgaccctgaccagtttggacataccctttgccatgtttgctgcc
aagaatttggaactggaggatgtggatcccatggtgaatcctccagattccccagagact
acatctcctcttcagggcagcctgcactctgatggctccagtgggggcagcagtggcaat
acccaggatgactttgtcatgatcgacttcaaaccagctttttctaaagacgacattctt
ccgatggacttggggaccttctatcgtgaatttcagaacccccctcagctgagcagcctc
tccatagatatcggggcacagtccatggctgaggacttggactcactaccagagaagctg
gctgtgcacgagaagaatgtccgagaatttgatgcctttgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
