Phocoena sinus (vaquita): 116757380
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Entry
116757380 CDS
T07759
Symbol
CARS1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116757380 (CARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psiu01007
]
116757380 (CARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116757380 (CARS1)
Enzymes [BR:
psiu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
116757380 (CARS1)
Amino acid related enzymes [BR:
psiu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
116757380 (CARS1)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116757380 (CARS1)
Prokaryotic type
116757380 (CARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
116757380
NCBI-ProteinID:
XP_032494714
Ensembl:
ENSPSNG00000018889
LinkDB
All DBs
Position
8:108064893..108111193
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AA seq
980 aa
AA seq
DB search
MAGSSAEHAPDYRSVLSISDEAARVRALNEHLSTRSYVQGFSLSQADVDAFRQLSGPPAD
AQLFHVARWFRHVAAILGSPRTPAPPCGLQASRGRRTQPPWSPPAGSEPCQLRLYNSLTR
RKDVFVPQDGRRVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYFKFDVFYCMNITD
IDDKIIKRARQNYLFEQYREKQPQAVQLLEDVHAALQPFSAKLRETSDPDKRQMLERLER
AVRLAAEALEEPARRGLEGEELDGRVQVLLEEAKDLLSDWLDSMHGSEVSDNSIFSKLPK
FWEAEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVRKIVDNGYGYVSNGSVYFDTVKFAN
SEGHCYGKLVPEAVGDQKALQEGEGDLSVSAERLSEKRSPSDFALWKASKPGEPSWPCPW
GKGRPGWHIECSAMAGTLLGASMDLHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHT
GHLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDALDYSANSMESALQFEK
LLNEFFLNVKDLLRAPVEVAGQFEKWEDKETELNKSFYDKKAAVHEALCDNVDTRTVLEE
MRALVGQCNHYMAARKAARRRPNRALLESVARYLTHMLKIFGAIEEESSLGFPVGGPGTS
LNLEPTVMPYLQVLSEFREGVRRVAREHRVPEVLQLSDALRDDILPELGVRFEDHEGLPT
VVKLVDRDTLLREREEKKRGPSATCVPVTADSLWPRLLCPAAYLRAPLGQEAPETQDIQE
GTRDLHSPNPFLLPIRGTRCPHGGPSPNLPRQPQAPPHGHPAQPPGPPSLPASCPDAACL
VGSGLWPPPVSSSQPPSRPPQVPGPLGVGPRRAVPGPAPDRSPPAAGQAEEEKRRKKEEA
ARKRQEQEAARLAKMKVPPSEMFLSESDKYSKFDENGLPTHDTEGKELSKGQAKKLKKLF
EAQEKLHQEYLQLVQNGSIP
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttcttccgcggagcacgctcccgactacaggtccgtcctgagcattagtgac
gaggcagccagggtgcgggccctgaacgagcacctgagcacgcgtagctatgtccagggc
ttctccctgtcccaggcggacgtggacgcgttcaggcagctctcaggccctcctgccgac
gcgcagctcttccacgtggctcggtggttcaggcacgtggccgcgatcctgggcagcccc
cgcaccccagccccgccctgtgggctccaagcaagcagaggccggcgcacgcagcccccg
tggtctcctccagccgggtccgagccgtgccagctccgcctgtacaacagcctgacccgg
aggaaggacgtgtttgtacctcaagacgggcggagggtgacgtggtactgctgcgggccc
accgtctacgacgcctcccacatggggcacgccaggtcctacatctccttcgatatcttg
agaagagtgctgagagattacttcaaatttgacgtcttttattgcatgaacatcacagac
attgatgataagatcatcaagagggcccggcagaactacttgtttgagcagtaccgggag
aagcagccccaggcagtgcagctcctggaggacgtgcacgctgccctgcagccgttttca
gcaaagttacgcgagacctcggatcccgacaagaggcagatgctggagcgcctggagcgc
gcggtgaggctggcggcggaggcgctggaggagccggcgcggcgcggcctggagggggag
gagctggacggccgcgtgcaggtgctgttggaagaagcgaaggatctgctttccgactgg
ctggattccatgcatggcagtgaagtgagcgacaattctattttctccaaactgcccaag
ttctgggaagcggagttccacaaagacatggaagccctgaacgtcctccctccagatgtc
ctaacccgcgttagtgagtacgtgccggagatcgtggacttcgtccggaagattgtggac
aacggttatggctacgtttcaaacgggtccgtctacttcgacacggtgaagtttgccaac
agtgagggacactgctacgggaagctggtgcccgaggccgtcggggatcagaaggccctg
caggagggggaaggcgacctgagcgtctcggctgagcgcctcagtgagaagcggtccccc
agcgacttcgccctctggaaggcctccaagcccggggagccatcctggccgtgcccctgg
ggaaaggggcgtccagggtggcacatcgagtgctcggccatggcaggcaccctcctcgga
gcctcaatggaccttcatggagggggcttcgacctccgcttcccccaccatgacaacgag
ctggcgcagtcggaggcctactttgaaaacgactgctgggtcaggtacttcctgcacacg
ggccacctgaccatcgccggctgcaagatgtccaagtcgctcaagaacttcatcaccatt
aaagacgcactgaagaagcactcagcccggcagctgcgcctggccttcctcatgcactcg
tggaaggacgcgctggactactcggccaacagcatggagtcggcgctgcagtttgagaag
ctcctgaacgagtttttcttaaacgtgaaagacctcctccgagcccccgttgaggtagcc
ggtcagtttgagaagtgggaagacaaggaaacagagctgaacaagagcttttacgacaag
aaggccgcggttcatgaggcgctctgtgataacgtcgacacgcgcaccgtcctggaggag
atgcgggctctggtcggccagtgcaaccactacatggcagcacggaaggccgcgaggagg
aggcccaaccgcgccctgctggagagcgtcgcccggtacctcacacacatgctgaagatc
ttcggggccatagaagaggaaagctccctgggtttccccgtcggaggacctggaaccagc
ctcaatctcgagcccacagtcatgccgtacctgcaggtgttgtcggagttccgggaagga
gtgcgaagggtcgcccgtgagcacagagtccccgaggtcctgcagctcagcgatgccttg
cgggacgacatcctgcctgagctgggggtgcggtttgaagaccatgaaggactgcccact
gtggtcaagttggtggacagagataccttactgagagagagagaagagaagaaaaggggt
ccctctgccacctgtgtgcctgtgaccgccgattctctctggcccagactcctgtgtcca
gccgcctacctgagggctccgcttggccaggaagcacccgaaacccaagacatccaagag
ggaacgcgtgaccttcattccccaaacccattccttcttcctatccggggcacacgctgt
ccacatggtggcccgagcccaaacctcccgaggcagcctcaggcccctcctcacgggcac
ccagcccagcccccaggccctccctccctccctgcctcctgcccggacgctgcctgcctg
gtgggaagtgggctctggcccccacccgtctcctccagccagcccccctcccgccctccc
caggtgcccgggcccctcggggttggccctcgccgtgctgtccctggtcccgcacccgac
cgcagcccccctgctgccgggcaggctgaagaagaaaagagaagaaagaaagaggaggcc
gccaggaagagacaagagcaggaagcggcaaggctggccaagatgaaggttccgcccagc
gagatgttcttgtcagaaagcgacaagtattccaagttcgatgaaaacggtctgcccaca
cacgacacggaaggcaaagagctgagcaaagggcaggccaagaagctgaagaagctcttc
gaggcccaggaaaagctgcaccaggaatacctgcagctggttcagaatggaagcatcccg
tga
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