Phocoena sinus (vaquita): 116757429
Help
Entry
116757429 CDS
T07759
Symbol
RTN3
Name
(RefSeq) reticulon-3 isoform X1
KO
K20723
reticulon-3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116757429 (RTN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116757429 (RTN3)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116757429 (RTN3)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116757429 (RTN3)
Autophagy
ER-phagy
ER-phagy recepters
116757429 (RTN3)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116757429 (RTN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
116757429
NCBI-ProteinID:
XP_032494849
Ensembl:
ENSPSNG00000004269
LinkDB
All DBs
Position
8:101961531..102019674
Genome browser
AA seq
1082 aa
AA seq
DB search
MRLRARASALSRRSAKAVCLSDPVLGARRGEATSESQPPDYFLFPPSLPSHIAIHPSPAF
ACATMAEPSAATQSPSVSSSSSVAESSAPGGGGGSPGACPALGAKSCGSSCAEGLSSLCS
DEPPSEIMTSFFCSSSEIYNTDLTILHGEKSKVLGSQPILAKERKDCLALLDVKKMEKPQ
GTSKDIADSPVSVAEGVHCNRPSIPDSFPDHPAFLSKDVGHMQEQINKDQESKNPNEVPS
RDDRTALDADDKFTLLTAQKPPTEQYKAEGICTYSLSPSEVSGVGIMEKDSPESPFEVII
DKAAFDREFKDAYKENINAFGSWAVHIDRESPADISESNDKVFPLRNKETGRSAASALLT
RQFSHTTAALEEVSRCVNDMHNFTSEILTWDLVPRVKPQSDKSDYITKATGPDMGEYTSE
IPVVNLKGNTHQKIPVCSISGSTTVPKSTGDWAETSLPQENAMPDCLNSTQEISIKGVQG
SVQKRDDTLPELPGSPFEKCVSLGSGVATVKVVLPDGHLKGEMNWQTSVLGGVTEADSSG
ESDDTVIEDITADTSFESNKIQAEKPVSIASAVVKTDERTIKESLHCNREGRRSGNFDGP
VSDSGPRQVQPDILGRSPAGEAACSQVPNVNVTSEDVKQSDSMSVVAPEKLVAAENPKLP
SEASPKVYNGKTEFSRNVTTSACLESLHEKCVKDIDDSSPEDLIAAFTETREKGIVGKGE
GNTFEATSEKTKDFKTALPVDVLHESESGGSEIKNIEGKYNEQSKETDGSELLDVFPTQG
TPVASLDLDQEWLTIKALKELNERKLEKSASVQDEIESPEEILKQTLTFAPESWPQRSYD
VLEQRDVKTGSDLGISRKPTITKEAARVDTTSSLSKTELVNKDVLPRLLTEFSVHDLIFW
RDVKKTGFVFGTTLIVLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAVQKSEEGH
PFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYV
GAVFNGITLLILAELLIFSVPVVYEKYKIQIDHYVGIVRDQTKSVVEKIQAKLPGIAKKK
AE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgcgctcgcgcttccgccctctcgcggcgctcggctaaggcagtctgtctg
tcggaccctgtcctcggagcaaggagaggcgaggcgacttcggagagccagccgcccgat
tattttcttttccctccctctctcccgtcccacatcgctattcacccctctcccgccttt
gcttgcgcaaccatggcggagccgtcggcggccactcagtccccgtccgtctcctcgtca
tcctccgtggccgagtcctctgcgcccggtggcggcggcgggagcccgggagcctgcccc
gccctgggggcgaagagctgcggctcctcctgtgctgagggattgagctctctttgctct
gatgagccaccttcagaaattatgacttccttcttctgttcatcttctgaaatatataac
actgaccttacaatactacatggagaaaaaagcaaagtgttaggcagccagcctatttta
gccaaagaaagaaaagactgcttggctcttctagatgtgaaaaagatggaaaagcctcag
ggaaccagtaaagacatagcagactccccagtttctgttgcagaaggagttcactgtaac
cgtccttccattccagacagtttcccagatcatcctgcttttctctcaaaggacgttggt
cacatgcaagagcagataaataaagatcaagagtccaagaacccaaatgaggtaccaagt
agggacgatagaactgccttggatgcagacgacaaattcactttgctaacagcccagaag
ccacccaccgagcagtataaagcagaaggtatttgtacatattccttgtccccctctgaa
gtttcaggagttggtattatggaaaaggattcccctgaatcaccatttgaagtaattatt
gacaaagcagcatttgacagagaatttaaagacgcatataaggaaaacataaatgctttt
ggtagctgggcagtgcacattgatagagaatcacctgcagacatttctgagtctaatgac
aaagtatttccactgagaaataaagaaacagggcgttccgcagcctctgcgttgctcact
aggcagttttcacacacaactgcagcactggaggaggtgtccaggtgtgtgaatgacatg
cataactttactagtgaaatactgacttgggatttggttccccgagtaaaaccgcagagt
gataaatctgactacatcacaaaagctacaggacccgacatgggtgaatatacctcagaa
attccagttgtaaatcttaaaggtaacactcatcagaaaattcctgtatgttctatcagt
gggagcactactgtcccgaaatcaacaggtgattgggcagaaacatctctcccacaggaa
aacgctatgccagactgtctcaactccacacaggaaatcagtatcaaaggtgtgcaaggc
agtgtgcaaaaaagagatgacacacttcccgagttacctggatctccatttgagaaatgt
gtctctcttggttctggagtggccacagtgaaagtggttttacctgatggccacctgaag
ggtgaaatgaactggcagacctctgtgttgggaggagtgacagaggctgacagttctggt
gagtctgatgacacggtgatagaggacatcacagcagatacttcatttgagagcaacaaa
attcaggctgaaaaacctgtttccatcgcaagtgctgttgtaaaaacagatgaaagaaca
atcaaagagagtcttcattgtaatagggaaggcagaagatctggaaactttgacggaccc
gtcagtgactctgggccacgacaagttcagcctgatattcttggaaggagtccagctggt
gaggcagcatgttcacaagtacctaatgtgaatgtcacgtcagaagatgtgaagcagtca
gatagtatgagtgtagttgctcctgaaaagcttgttgcagctgagaaccccaaacttcct
tcagaagcatctccaaaggtttataatggtaagacagaattctcacgaaatgtgaccacc
tctgcctgtttggagtcattgcatgaaaaatgtgttaaagatatagatgattcttcccca
gaggacctgatagcagcctttacagaaaccagagagaaaggaatagtaggtaaaggtgaa
ggaaataccttcgaagcaacatcagagaaaactaaggactttaaaacagctcttcctgta
gatgttttacatgaaagtgagtcgggtggttctgaaattaaaaacatagaaggcaaatac
aatgaacaaagcaaggaaacagatgggagtgagcttctggatgttttccctacccagggt
actccagtagcatctcttgacttagaccaggaatggctcacaatcaaagcactgaaagaa
ctgaatgaaaggaagcttgagaagtcagcttctgtacaggatgaaatagaatctcccgaa
gaaatactcaagcagactttaacatttgctccagaatcttggccacagagatcctatgat
gtcctagaacagagagatgtcaagacaggatctgatctcgggatttccaggaagcccact
attaccaaagaagccgctagggtagataccacttccagccttagcaagactgaactggta
aacaaggacgtcctaccaagacttctgacagaattctcagtgcacgacttaattttctgg
cgagatgtgaagaagactgggtttgtctttggcaccacactgatcgtgctgctctccctg
gcagctttcagtgtcatcagtgtggtttcttacctcatcctggctcttctgtctgtcacc
atcagcttcagggtctacaagtctgtcatccaagctgtacagaagtcagaagaaggccat
ccattcaaagcctacctggatgtagacatcactctgtcctcagaagctttccataattac
gtgaacgctgccatggtgcacatcaacagggccctgaaactcattattcgtctctttctg
gtggaagatctggttgactccttgaagctggctgtcttcatgtggctgatgacctacgtt
ggtgccgttttcaatgggatcacccttctgattcttgctgaactgctcattttcagtgtt
ccagttgtctatgagaagtacaagatccagatcgatcactatgttggcatcgtccgcgat
cagaccaagtcagttgttgaaaagattcaagcaaaactccctggaattgcaaagaaaaag
gcagaataa
DBGET
integrated database retrieval system
