Phocoena sinus (vaquita): 116757575
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Entry
116757575 CDS
T07759
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05014
Amyotrophic lateral sclerosis
psiu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116757575 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116757575 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116757575 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116757575 (NUP98)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116757575 (NUP98)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116757575 (NUP98)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116757575 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
116757575
NCBI-ProteinID:
XP_032495349
Ensembl:
ENSPSNG00000007355
LinkDB
All DBs
Position
8:complement(60311738..60412771)
Genome browser
AA seq
1817 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTASTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSSGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTGFGTSTTGFGTNPGGLFGQQNQQATSLFSKPFAQAITTQTTGF
SFGNTNALGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTSTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIF
GSKPGPGTLGAGLGAGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSEDLASPSDYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESAGNNHNSSNSVDDTIVALNMHAALRNGLEGSSEETSFHEESLQDDRE
EIENNTYHMHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTS
TKKLKTAPLPPAGQATPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMIDITQEPVLD
SMLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDMVLDQRFSRLPSKA
DTSQEICSPRLPISATHSSKSRSLVGGLLQSKFASGTFLSPSASLQECRTPRTSSLMNIP
STSPWSVPPPLTSVFTVPSPAPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDLALFMG
RSFRVGWGPNWTLANSGEQLSGPQELENHQIADSMEYGFLPNPVAVKSLTESPFKVHLEK
LSLRQKKLDEDLQLYQTSLELKLKHSTVHVDELCPLIVPNPGVAIIHDYADWVKEASGDL
LEPQIVKHWSLTWTLCEALWGHLKELDSQLDEPTEYIQILERRRAFSRWLSHTAAPQIEE
EVSLTRKDNPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLV
DWHQLQADCFIEEERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAIHLWYLLPPTA
SISKALSMYEEAFQNTSEGDRYACCPLPSYLEDSGFVVEEEQDSLRPLQDVCFHLLKLYS
DRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEG
LWEWAIFVLLHIDNSSMREKAVRELLTRHCQLLETPESWAKEIFLTEKLCVPAEWIHEAK
AVRAHMESDRHLEALYLFKAGHWNRCHKLVIQHLASDAIINENYDYLKGFLEDLAPPERS
SLIQDWETSGLVYLDYIRVIEMLHHIQQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKD
RLAQSDMAKRVANLLRVVLSLQHAPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEE
LRSLTQSYLRELTVGSQ
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcaccggtggctttggcacagct
tcaacatttgggcagaatactggttttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaataccggaggcctgtttggaaattcacagaccaaaccagga
ggcttatttggtaccaattcatttagccagccagctacctccacaagcagtggctttggg
tttggcacatcaacaggaacatcaaacagcttgtttggaactgcaagcacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaacaggctttgggaatttt
ggaacaagtaccagcagcgggggactttttggaactacaaataccacctctaatcctttt
ggtagcacatctggctccctctttgggccaagtagttttacagctgctcctactgggact
actattaagtttaaccctccaactggtacagatactatggttaaagctggagttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcccta
gaggaacttcgtttagaggattatcaggccaaccggaaaggcccgcagaaccaggtggga
gcaggtaccacgactggcttgtttgggtcttctccagccacctccagtgcaacaggactc
ttcagttcttccactacaaattcaggctttgcctatggtcagaacaaaacaggctttgga
actagtacgactggatttggaacaaatccaggtggtctttttggccaacagaatcagcag
gctaccagcctcttcagcaaaccatttgcccaggccataaccacccagaccactggcttt
tcctttggtaataccaacgcactaggacagccaagcaccaacaccatgggtttatttgga
gtaacccaagcctcacagccgggaggtctttttgggacagctacaaacaccagcactggg
acagcatttggaacgggaacaggtctctttgggcagaccagtactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcgtttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttgggtttggcacaaataccagtgggaatagtattttt
ggaagtaaaccaggacctggaactctgggagccgggcttggtgcaggatttggaacagct
cttggtgctggacaagcatctttatttgggaacaaccaacctaagatcggagggcctctt
ggtacaggagcctttggggcccctggatttaatactacgacagccactttgggctttgga
gccccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
ctccaacagcacatcaatagtctgacatactcaccttttggagactctcctctctttcgg
aatcccatgtcagaccctaagaagaaagaagagagattgaaaccgacaaatccagcagcc
cagaaggctctcacaacacctacgcattataaactgacaccccgccctgccaccagagtc
cgaccgaaggctttacaaacaacaggcacagccaagtcacacctcttcgatgggctagat
gacgatgaaccatccttagccaacggagcattcatgcccaagaagagcattaagaagttg
gttttgaaaaaccttaacaatagcaatctcttctctcctgttaatcgtgattcagaagat
ctagcttcaccatctgattatccagaaaatggagagagattcagttttctgagcaaacca
gtcgatgaaaaccatcagcaggatggagatgatgattctcttgtgtcacgtttttatact
aaccctattgccaaacccattcctcaaaccccagagagtgctggaaataaccataacagc
agcaacagtgtggatgataccattgttgcgttaaacatgcatgctgccttgcgaaatggg
ctggaaggaagcagtgaagagacctcttttcatgaggagtcacttcaggatgaccgagaa
gaaatagaaaataatacttaccatatgcatccagcaggcatcgttctcactaaggttggc
tactatactattccatccatggatgacctagctaaaattaccaatgaaaaaggagagtgc
attgtctctgacttcactattggtcgtaaaggttatggttcaatctattttgaaggagat
gtgaatttgacaaatctaaatttagatgacattgtgcatatccgaaggaaagaagtgatt
gtttacttagatgataatcaaaaaccacctgtgggtgaagggctaaataggaaggctgaa
gttacattggatggagtttggccaacagataaaacatctcgttgtttaataaagagccca
gatcgacttgctgatatcaactatgagggaagattggaagcagtttcaaggaaacaggga
gctcagttcaaagagtaccgtcctgaaactggttcttgggtatttaaggtctctcatttt
tctaagtatggccttcaggattctgatgaagaggaggaggaacggccatccaaaactagt
acaaagaagttgaagactgcccctttacctcctgcaggccaggccaccccattccagatg
gctcttaatggcaaaccagcacctccgccccagagccagagcccagaggtggagcagtta
gggagggttgtggaactggacagtgacatgatagatatcacccaggagccagttttggat
tccatgttagaagagagcgtgcctgaggatcaggaacctgtgtctgcctcaacacacatt
gcgtcttcactgggaattaatccacatgtcttacagatcatgaaagcatcattgcttgct
gatgaagaagatgtagatatggtcctggatcaacgcttcagtcgccttccttctaaagca
gatacgtctcaagaaatctgttctcccaggctccccatttcagcaactcactcatcaaaa
tcccgttcattagtaggtgggttactacaatcaaaatttgcaagtggaacttttctttca
ccaagtgcctctttacaagagtgtcgcactcccagaacatcgtcattgatgaatattcca
tccacatccccttggtctgtccctccacccctgacctctgtgtttacggtgcccagccca
gcccctgaggttcagttgaaaacagtgggtacacgcagacaaccaggcctagtccctctt
gaaaaatctgtcacctatggaaaggggaaactcctgatggacctggccctatttatggga
cgctcatttcgggttggttggggccctaactggactcttgctaatagtggagaacagctg
agtggccctcaggaactggaaaatcatcagattgctgattctatggaatatggattcctg
cctaatccagtagctgttaaatccctaactgagtctccattcaaagttcatttggaaaaa
ctcagtttgaggcaaaagaagctggatgaagacctgcaattataccagacatctctggag
cttaaattaaaacatagcactgtccatgtggatgagctgtgtcctctcattgtccccaat
ccgggagttgctatcattcatgactatgcagattgggttaaggaagcatcaggagactta
ctggaaccacaaattgtgaagcactggagcctaacgtggacattatgtgaagctctatgg
ggccacctgaaggagcttgacagccagctggatgagcccactgaatacattcagattctg
gagcgaagaagagctttctctcgctggctgtcccatacagctgcacctcaaattgaggag
gaagtctccttaacccgaaaagacaaccctgtggaggctgtcttcagctacctcacgggc
aagaggatcagtgaggcctgctccctggcccagcagtcaggtgatcatcgtcttgccctt
cttttatcccagttggttggcagccagtcggtgcgggagctgcttactatgcagctggta
gattggcatcagctccaggctgactgtttcatcgaggaggagagactgcgtatctttgcc
ctcttggctggaaaaccggtatggcagctctcagagcagaagcaaatcaatgtgtgctca
cagttggattggaaaaggtccctggctatccatctttggtatttgctcccaccaacagcc
tccatttccaaggcactcagcatgtatgaagaagcatttcagaatacctctgagggtgac
agatatgcctgctgcccacttccctcatacctggaggactctggctttgtggtagaggag
gagcaagactcactgagacctcttcaagatgtctgctttcaccttctaaaactctatagt
gacagacattatgatctcaaccagctgctggagcctcgaagcataacagcagatcctttg
gactaccgtctaagctggcacttgtgggaggtgctgcgggctcttaactacacccatctc
tcagagcagtgtgagggtgtgctgcaggccagttatgctggccagctggaaagtgagggg
ctctgggagtgggccatctttgtcctcctgcacattgacaactcaagcatgcgtgagaag
gctgttcgagagctgcttacgcggcactgccaactgttggagacccctgaatcatgggct
aaggagattttcctgaccgagaagctttgtgtgcctgctgagtggattcatgaggccaaa
gcagtgcgagcacacatggaatccgacaggcacttggaggccctctatttatttaaagcg
gggcactggaaccgctgccacaaactcgtcatccagcacttagcttctgatgccattatt
aacgagaactatgactacctgaaggggttcttggaagacctggcacccccggagcgcagc
agcctaatccaggactgggagacatctgggcttgtttacctggactacattcgggtcatc
gaaatgctccatcatatacagcaggtggattgctcaggttatgagctagagcagttacat
accaaagtgacctcactgtgcaaccggatagagcagatccagtgttacaatgccaaggat
cgcctggctcagtcagacatggccaaacgtgtagccaacctgctgcgggtggtactgagc
cttcagcatgcccctgatgcaacctccgactcaacgccagaccctcagcgagtccctttg
cgcctgttggctccccacattggccggctccccatgcctgaggactatgccttggaggaa
ctgcgcagtctcacacagtcctacctgcgggaactgactgtggggagccagtga
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integrated database retrieval system
