Phocoena sinus (vaquita): 116757673
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Entry
116757673 CDS
T07759
Symbol
LARGE2
Name
(RefSeq) LARGE xylosyl- and glucuronyltransferase 2 isoform X1
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00515
Mannose type O-glycan biosynthesis
psiu01100
Metabolic pathways
Module
psiu_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
116757673 (LARGE2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116757673 (LARGE2)
Glycosyltransferases [BR:
psiu01003
]
Glycan extension
O-Glycan
116757673 (LARGE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Nucleotid_trans
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
116757673
NCBI-ProteinID:
XP_032495565
Ensembl:
ENSPSNG00000004402
LinkDB
All DBs
Position
8:96122424..96127800
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AA seq
723 aa
AA seq
DB search
MLPRGRPRALGAAALLLLLLLIGFFLFRGDLDCESCEREASGGGGDPGSLPRSLTPRVLP
DERPRPRGAAAFDGDPPADPGGHNGSDCILPRPRPPKCELLQVAIVCAGHNSSRDVITLV
KSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVQISFYNADELKPQVSWIPNKHYS
GLYGLMKLVLPSALPPDLARVIVLDTDVTFASNIAELWALFAHFSDKQVIGLVENQSDWY
LGNLWRNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWKLTATRELLTLPATSLADQDI
FNAIIKEHPWLVQPLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVESF
RNLYLTFLEYDGNLLRRELFGCPRPPPPGAEHLQRALAQLDEEDACFEFRRQQLTVHRVH
ITFLPHKPPPPQPHDVTLVAQLSMDRVQMLEALCRHWPGPMSLALYLTDAEAQQFLRFVE
TSVVLSARQDVAYHVVYREGPLYPINQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRA
SIKQLELGSGRKAALVVPAFETLHYRFSFPSSKAELLALLDAGSLHTFRYHEWPRGHAPT
DYARWREAQAPYHVQWAADYEPYVVVPRDCPRYDPRFAGFGWNKVAHVVELDAQEYELLV
LPEAFVIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRRYGAAALKYLTALQQPR
GPT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccgagggcgcccccgggcgctgggggccgcagcactgctgttgctgctgctt
ctgatcggtttcttcctgttccgtggggacctggactgtgagagctgcgagcgggaggcg
agtgggggcgggggtgacccgggatccttacccaggtcgctaacgccacgtgtacttcca
gacgagcggccgcggccgcggggggctgctgccttcgacggagacccgccggcagacccc
gggggccacaacggctcggattgcatcctgccgcggccgcggccgcccaagtgcgagctc
ttgcaggtggctatcgtgtgtgcgggtcataactccagcagagacgtcatcaccctggtg
aagtccatgctcttctacaggaaaaatccactgcacctccacttggtgactgacgccgtg
gccaggaacatcctggagacgctatttcacacatggatggtgcctgctgtccagatcagc
ttctacaacgctgatgagctcaagccccaggtctcctggatacccaacaagcactactct
ggcctctatgggctaatgaagctagtgctgcccagcgccctgccccctgacctggcccgt
gtcattgtcctggacacagatgtcacctttgcctccaacattgcagagctctgggcactc
tttgctcacttttctgacaaacaagtgattggtctcgtggagaaccagagcgactggtac
ctcggcaacctctggaggaaccacaggccctggcctgccttgggccggggatttaacaca
ggcgtgatcctcctgcggctggaccggctccggcaggctggctgggagcagatgtggaag
ctgacagccacgcgggagcttctcaccctgcctgccacctcactggctgaccaggacatc
ttcaatgccataatcaaggagcacccgtggctggtgcagcccctgccctgcgtctggaac
gtgcaactgtcagaccacacgctggctgagcgctgctactcagaggcgtccgacctcaag
gtgatccactggaactcaccaaagaagcttcgcgtgaagaacaagcatgtggaatccttc
cgcaacctctacctgaccttcctggagtacgatgggaacctgctgcggagagagctcttt
gggtgcccccgcccgccccctcctggggccgagcatttgcagcgggccctggcgcaactg
gacgaggaggacgcatgctttgagttccggcggcagcagctcactgtgcaccgtgtgcac
atcaccttcctgccccacaagccaccgcccccccagccccacgatgtcaccctggtggcc
cagctctccatggaccgggtgcagatgctggaagccctgtgcaggcactggccgggcccc
atgagcctggccttgtacctgacagacgcagaggcccagcagtttctgcgtttcgtggag
acctcggtggtgctctccgcccggcaggatgtggcctaccacgtggtgtaccgtgaaggt
cccctctaccccatcaaccagcttcgcaacgtggccttggcccaggccctcacaccttac
gtcttcctcagtgacattgacttcctgcctgcctactccctctacgactacctcagggcc
tccatcaagcagctggagctgggcagcgggcggaaggcagcgctggtggtgcccgcattt
gagaccctgcactaccgcttcagcttccccagttccaaggccgagctgctggccttgctg
gacgctgggtctctccacaccttcaggtaccatgagtggccccggggtcacgcgcccaca
gactacgcccgctggcgagaggctcaggccccataccacgtgcagtgggcagccgactac
gagccctatgtggtggtgccacgtgactgcccccgctacgacccccgctttgcgggcttc
ggctggaacaaggtggcccacgtcgtggagctggatgcacaggaatacgagctgttggtg
ctgccggaggcctttgtcatccacctgccgcacgccccaagcctggacatctcccgcttc
cgctccagccccacctatcgtgactgcctccaggccctcaaggacgagttccaccaggat
ctgtcccgccgctacggggctgctgccctcaaatacctcaccgccctgcagcagccccga
ggccccacctga
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