Phocoena sinus (vaquita): 116757732
Help
Entry
116757732 CDS
T07759
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04270
Vascular smooth muscle contraction
psiu04360
Axon guidance
psiu04611
Platelet activation
psiu04625
C-type lectin receptor signaling pathway
psiu04810
Regulation of actin cytoskeleton
psiu05135
Yersinia infection
psiu05152
Tuberculosis
psiu05163
Human cytomegalovirus infection
psiu05200
Pathways in cancer
psiu05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116757732 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
116757732 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
116757732 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
116757732 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
116757732 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116757732 (ARHGEF12)
05205 Proteoglycans in cancer
116757732 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
116757732 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
116757732 (ARHGEF12)
05152 Tuberculosis
116757732 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116757732 (ARHGEF12)
Membrane trafficking [BR:
psiu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116757732 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
116757732
NCBI-ProteinID:
XP_032495758
Ensembl:
ENSPSNG00000020278
LinkDB
All DBs
Position
8:complement(12313871..12458900)
Genome browser
AA seq
1544 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQFPLADSEVEPSVVGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYSRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAAVTSSKPLGDGLAVSEIEADPGDGLGRIDYGSGDAS
RPSSESADSPKSGLKERIYLEENPEKSEVIQDTDTQSLIGSPSTRIAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKIDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHISTPSSVSPEPQDSAKLRQSGLTSEGADIGY
LPANSMSSVVSGATLSQEGGKENDMGSKQVGETPASGDSLDGTPRTPSTIFDFPPPPLDQ
VQEEEWEVERVTEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLA
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTGDSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQSPPCEGDNDEEEPPKLKVEHHGISVTGLQSPDRDLGLESPLMSSKPQSHSLDTS
GKSEVDDLFVAERQFAKEQHADGTLKEVGVNYQITIPDPHLPVSEERWALDALRNLGLLK
QLLVQQLGLTEKSTQEDWPHFPRCRTASLGVQADSGTQKPDNIKAYHPCEGQMPFRTGTG
DISTCYSPRTSTESSAPRDSVVLAFQDSQASNILVMDHMVMTPEMPPAEPEGGLDESGEH
FFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGTCLTLDGCETAQESSTDEEVASSLPPQ
PAAGIPSMDSTRRQQRSPQNPHSDGAVSPFTPEFLVQQRWGAMEDSCPEIRSPASSADSP
SQIMEYIRKIEADLEHLKKVEESYSILCQRLAGSALTDKHSDKS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtaca
tcacatgattttgaccccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtgttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggcgtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatctggaagtggtgaagctaatcaaatcgggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagtttccacttgctgattctgaa
gtagagccatcagtcgttggacatatgtctcccatcatgacatcccctcattcacctgga
gcatctgggaatatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacggcta
cagttattgcaggaagattacagccgaacacctgcccaaagattgctaaaagagatccaa
gaggccaagaaacacattcctcaactgcaagagcagttatccaaagccacaggctctgct
caggatggagctgcagttacatcctccaagccattaggcgatgggctagcagtcagtgaa
atagaagcagatcctggtgatggactaggcagaattgactatggcagtggagatgcttct
cggcccagtagtgaaagtgcagatagtcccaagagtggcctgaaagagaggatttatcta
gaggaaaacccagagaaaagtgaagtaattcaggacactgacactcaatcacttattggg
agtccctctacccgtatagcacctcatattattggagcagaggatgatgactttggtact
gaacatgaacagatcaatgggcagtgcagctgtttccagagcattgaactgctaaaatct
cgccctgctcacttggctgttttcttacaccatgtagtttcacagtttgaccctgcaaca
ttgctctgttatctctattcagacctgtataaacagaccaattccaaggagactcgtcgt
gtcttccttgagtttcatcagttcttcctggatcgatctgcacacctgaaagtttctgtt
cctgatgaaatatcagtagatctagaaaaaagaagacccgagcttattcctgaggatcta
catcgccactatatccaaactatgcaagaaagagtccacccagaagttcaaaggcacttg
gaagattttcgacagaaacgtagcatggggctgacgttggctgaaagcgaactgactaaa
attgatgcagagagagacaaggaccgggtaactctggagaaggaacgggcatgtgcagag
cagattgttgccaaaattgaagaagtgttaatgactgctcaggctgtagaagaagataag
agttcaacaatgcaatatgttattctcatgtacatgaagcatttgggagtaaaagtgaaa
gaacctcgaaatttggagcacaagcgaggtcggattggattccttccaaaaatcaagcaa
agtatgaagaaagatagggaaggcgaagaaaaagggaagcgaagaggattccccagcatc
ttgggacccccaaggagaccaagccgtcatgacaacagtgcaattggcagagccatggaa
ctacagaagcagcgccaccctaagcacatatccacaccctcatctgtgagtcctgaacct
caggactctgctaagttgcgccagagtggattaacaagtgaaggagcagacattggatac
ctgccagccaattccatgtcctccgtggtttcaggggccactctttcccaggaaggaggg
aaagagaatgatatgggatcaaagcaagttggagaaacgccagcatctggagactcctta
gatggcacacctcgtactcccagtaccatctttgacttcccacctcctccattagaccaa
gtgcaggaggaggaatgggaagtggaaagggtgactgaacatgggacaccaaagcccttt
cgaaagtttgacagcatagcttttggagaaagtcaaagtgaggatgaacagtttgaaaat
gacttagagacagatccacccaactggcagcagctcgttagtcgagaagtgttattggca
ctaaagccttgtgagatcaaaagacaggaagtaattaatgaattgttctacactgaaaga
gctcatgttcgaacattgaaggttctagatcaagtgttttatcagcgagtttccagagaa
ggaattctgtcaccttcagaactacggaaaattttttcaaacttagaagatattcttcaa
cttcacattgggttgaatgagcaaatgaaggctgttcgaaagaggaatgagacatctgtt
attgatcagattggggaagatttgctgacttggttcagtggacccggggaggaaaagctg
aaacatgctgctgctaccttttgcagtaaccaaccctttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccagacttttgtgcaagatgctgagagtaatccactg
tgtcgtcgtctgcagctgaaagatatcattcccacccaaatgcagaggcttactaagtac
cctcttctattggataatattgccaaatacacagaatggccaacagaaagggagaaggtg
aagaaagctgcagatcactgtcgtcaaatcttaaattatgtaaatcaggctgttaaggag
gcagaaaacaagcagcgcttagaagattatcagcgtcgccttgatacctccaatctgaag
ttgtcagagtacccaaatgttgaagagctcaggaatttggatttaacaaaaaggaagatg
attcacgaagggccattggtttggaaggtgaatagagataaaactattgatctatacact
ttgctgctggaagatattcttgtattgttacaaaagcaggacgatagactggtgttaagg
tgtcatagtaagattctggcatctacaggtgatagcaaacacacctttagccctgtcatc
aagttgaatactgtgttggttcgacaagtggcaacagataacaaagctttattcgtcatc
tccatgtctgacaatggagcccaaatttatgaactggtggcacagacagtttctgaaaag
actgtctggcaggacctaatctgtcggatggcagcgtcagtgaaggagcagtccacaaag
ccaattccactgccacagtcgccaccttgcgaaggagacaatgatgaagaagaacctcca
aaattaaaagtggaacatcatggcatttcagtcactggtctgcagagtccagacagagat
ttgggattagagtctcctttaatgtcgtcaaaacctcaatctcattcactggatacctct
gggaaatcggaggtggatgatctctttgtggctgagagacagtttgcaaaggagcagcat
gcagatggaactctaaaggaagttggagtcaattatcaaatcacaatcccagatccacac
ttgcctgtctcagaagagcggtgggcattggatgcactaaggaatttgggtttgttgaag
cagttgctggtacaacagctgggtttgactgagaagagcactcaggaagactggccacat
ttcccaagatgcaggacagcctctctgggggtgcaggcagacagtggaacccagaagcct
gacaatattaaggcctatcatccttgtgaaggacagatgccctttagaactggaactggt
gacatttcaacttgttacagtccacggacttcaactgaatcttctgctccacgggattca
gtggtactggcattccaagatagccaggcaagtaacattttagtaatggaccacatggtc
atgaccccagagatgcctcccgcagagccagaagggggtcttgatgagagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagtt
aaaaaggaagagaaggatgttaatttgcgcatctcaggaacctgtttgacccttgatggc
tgtgaaacagcgcaggagagctccacggatgaggaggttgcttcctcgcttcccccgcag
cccgcggcgggcatcccctctatggactctacccgccggcagcagcgttctccccagaat
cctcattctgatggggcagtttcacctttcaccccggaattcctggtccagcagcgctgg
ggagctatggaggattcctgtcctgagatccggagtcccgcctctagtgcagattcacca
agccagatcatggagtacattcgtaagatagaggctgaccttgaacacttaaagaaggtg
gaggaaagttacagcattctttgccaaaggctggctggatcagccctcacagacaagcac
tcagataaaagttag
DBGET
integrated database retrieval system
