Phocoena sinus (vaquita): 116757744
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Entry
116757744 CDS
T07759
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03320
PPAR signaling pathway
psiu04659
Th17 cell differentiation
psiu04919
Thyroid hormone signaling pathway
psiu04920
Adipocytokine signaling pathway
psiu04928
Parathyroid hormone synthesis, secretion and action
psiu05200
Pathways in cancer
psiu05202
Transcriptional misregulation in cancer
psiu05207
Chemical carcinogenesis - receptor activation
psiu05216
Thyroid cancer
psiu05222
Small cell lung cancer
psiu05223
Non-small cell lung cancer
psiu05226
Gastric cancer
psiu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116757744 (RXRG)
09152 Endocrine system
04920 Adipocytokine signaling pathway
116757744 (RXRG)
03320 PPAR signaling pathway
116757744 (RXRG)
04919 Thyroid hormone signaling pathway
116757744 (RXRG)
04928 Parathyroid hormone synthesis, secretion and action
116757744 (RXRG)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116757744 (RXRG)
05202 Transcriptional misregulation in cancer
116757744 (RXRG)
05207 Chemical carcinogenesis - receptor activation
116757744 (RXRG)
09162 Cancer: specific types
05226 Gastric cancer
116757744 (RXRG)
05216 Thyroid cancer
116757744 (RXRG)
05222 Small cell lung cancer
116757744 (RXRG)
05223 Non-small cell lung cancer
116757744 (RXRG)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116757744 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116757744 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psiu03310
]
116757744 (RXRG)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116757744 (RXRG)
Nuclear receptors [BR:
psiu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116757744 (RXRG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
116757744
NCBI-ProteinID:
XP_032495802
Ensembl:
ENSPSNG00000014831
UniProt:
A0A8C9E590
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Position
1:complement(122455086..122499843)
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AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPTGFGGSPSHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtacggaaattattctcacttcatgaagtttcccacaggcttcggaggttcccccagc
cactctggctccacgtccatgagcccgtcagcagccttgtccacagggaagcccatggac
agccaccccagctacactgacaccccagtgagtgccccacggactctgagtgcagtggga
acccccctcaatgccctgggctctccatatcgagtcatcacttccgccatgggcccaccc
tcaggagctcttgcagcccctccaggaatcaatttggttgccccgcccagctctcagcta
aatgtggtcaacagtgtcagcatttcagaggacatcaaacccttaccagggcttcctggc
attggaaacatgaactacccatccactagccctggatctctggtgaaacacatctgtgcc
atctgtggggacagatcctcaggaaagcactacggtgtgtacagttgtgaaggctgcaaa
gggttcttcaagagaaccataaggaaagacctcatctacacgtgtcgggataataaagac
tgcctcattgacaagcgtcagcgcaaccgctgccagtactgtcgctatcagaagtgcctt
gtcatgggcatgaagagggaagctgtgcaagaagaaaggcagagaagccgggagcgggct
gagagtgaggcagaatgtgccagtagtggccatgaagatatgcccgtggagaggattctg
gaggctgaacttgctgttgaaccaaagacagaatcctacggtgacatgaacatggagaat
tcgacaaatgaccctgtcaccaacatatgccatgctgccgacaagcagctctttactctc
gttgaatgggccaagcgtattccccacttctctgacctcaccttggaggaccaggtcatt
ctgctccgggcagggtggaatgagttgctgatcgcctccttttcccaccgctcggtttct
gtgcaggatggcatccttctggccacgggtttacatgtccaccggagcagtgcccacagt
gctggggttggctccatctttgacagagttctgactgagctcgtctccaaaatgaaagac
atgcagatggataagtcggagctggggtgcctacgagccatcgtgctatttaacccagat
gccaagggtctgtccaacccctctgaagtggagactctgcgagagaaggtttatgccacc
ctcgaggcctacaccaagcagaagtacccggaacaaccaggcaggtttgccaagctgttg
ctgcgcctcccagccttgcgctccatcggcttgaaatgcctggagcacctcttcttcttc
aagctcatcggggacacacccattgacaccttcctaatggagatgttggagaccccactg
cagatcacctga
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