Phocoena sinus (vaquita): 116757824
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Entry
116757824 CDS
T07759
Symbol
UBE4A
Name
(RefSeq) ubiquitin conjugation factor E4 A
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116757824 (UBE4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116757824 (UBE4A)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116757824 (UBE4A)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
U-box type E3
116757824 (UBE4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
116757824
NCBI-ProteinID:
XP_032496044
Ensembl:
ENSPSNG00000003414
LinkDB
All DBs
Position
8:complement(14144872..14180492)
Genome browser
AA seq
1067 aa
AA seq
DB search
MTDQENNNNISSNPFAALFGSLADAKQFAAIQKEQLKQQSDELPASPDDSDNSVSESLDE
FDYSVAEISRSFRSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMA
VDLEDQDWLDMNNVEQAVFTRLLLQDPGNHLINMTSSTTLNLSADRDAGERHIFCYLYSC
FQRAKEEITKVPENLLPFAVQCRNLTVSNTRTVLLTPEIYVDQNIHEQLVDLMLEAILGG
HFEGVAEFLDEVIEALILDEEVRTFPEVMIPVFDILLGRIKDLELCQIPLYAYLDILLYF
TRQKDMAKVFVEYIQPKDPSNGQMYQKTLLGVILNISCLLKTPGVVENHGYFLNPSRSSP
QEIKVQEANIHQFMARFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQ
MPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCALKELNDEERKIKNV
HMRGLDKETCLIPAVQEPKFPQNYNLVTENLVLTEYTLYLGFHRLHDQMVKINQNLHRLQ
VAWRDAQQSSSPAADNLREQFERLMTVYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAI
GNEGSQPRELTFPLPDGYSSLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHF
ITIFTGSIERMKNPHLRAKLAEVLEAVMPHMDQTPNPLVSSVFHRKRVFCNFPYASHLAE
ALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMN
PPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIEKDRGEWDSLTPEARREKEAGLQMFG
QLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKD
FSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNM
IVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRSTIA
RHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQQKEQLE
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccaggagaataacaacaacatctcaagtaacccctttgctgctctttttggc
tccctggctgatgccaagcagtttgcagcaatccaaaaagagcagctgaagcagcaatct
gatgaactcccagccagcccagatgactcagataatagtgtgtcagagagcctggatgaa
tttgattactctgtggctgagattagccgctcattccgttcacagcaggaaatatgtgag
caactcaacatcaatcacatgatccaaaggatcttcctcatcactctggacaacagtgac
ccaagcctgaaaagtgggaatggcatccccagccgttgtgtgtatttggaagaaatggca
gtagacctggaagatcaagactggcttgatatgaacaacgtagagcaggccgtcttcact
cgcttattacttcaagatccaggcaaccacttgattaacatgacctcttctacaacgttg
aatctctctgctgatcgagatgcaggggagaggcacattttttgttacctttattcctgt
ttccaaagagccaaggaagagattaccaaagttccagagaacctgctaccctttgcggtg
cagtgcaggaacctcactgtgtccaatacccgaacagttctcctcacccctgagatctat
gttgaccaaaacatccacgagcaactggtagatttgatgttggaagccatcctaggaggc
cattttgaaggtgtagctgagtttctggatgaggtcatcgaagccttgatactggatgag
gaagttcgaacatttccagaagtcatgattccagtgtttgatattttattgggccgaata
aaagatctagaactctgccagatcccgttgtatgcatatctggacattcttctgtatttc
actaggcaaaaggatatggcaaaggtttttgtagaatacattcagcccaaggatcctagt
aatgggcagatgtaccagaagaccttgctgggagtaatcctgaatatctcctgcttatta
aagactccgggtgtagtagaaaatcatggctacttcctgaatccatctcgttccagtccc
caggagatcaaagtacaagaggccaacattcaccagttcatggctcggttccatgaaaag
atctaccagatgttgaagaacttactccagctctctccagaaaccaaacactgtatcttg
tcctggcttggaaactgtttgcatgcaaatgcaggccgcaccaagatttgggccaatcag
atgccagaaatcttcttccaaatgtatgcctcggatgccttctttctgaatttgggtgct
gctctcctgaagttatgccagccattttgcaaacccagatcctctcggctcctcaccttt
aatcccacttactgtgccctgaaggagttgaatgatgaagaacgaaaaataaaaaatgta
cacatgagaggtttggacaaagaaacctgtttgatcccagctgtgcaggagccaaagttt
ccccagaactacaaccttgtaacagaaaaccttgtcctgacagagtacaccttgtacttg
ggatttcacaggttgcatgatcagatggtaaaaatcaaccaaaatctgcatcggctgcag
gtagcctggcgggatgctcagcaaagttctagcccggctgctgacaacctccgtgagcag
tttgaacgactgatgaccgtctatctttctactaagactgccatgactgagccgcaaatg
ctgcagaactgcctaaatttgcaggtgtccatggccgttctcctagttcaactggccata
ggcaatgaaggctcacagccgagagagctaacttttcctttgccagatggctacagttct
ttggcttacgtgccagaattttttgcagataacttgggtgatttcctcatttttctccgc
cgctttgccgatgacatcttggagacatcagcagattccctggaacatgtccttcatttt
atcaccattttcactggaagcatagaaaggatgaagaatccccacctaagggccaaactc
gctgaggtgttggaagcagtgatgccccacatggatcagaccccaaatcccttggtatcc
agtgtgttccaccggaaacgtgtgttctgcaactttccctatgcatcccaccttgcagaa
gctctaatcaaggtctttgtggacattgagtttacaggagacccccatcagtttgagcag
aagtttaattaccgccgccccatgtatcccatcctcaggtacatgtggggaacagatacc
tatcgagagagcattaaggatttggctgactatgcctctaagaatttagaagccatgaat
cccccacttttcctccgctttcttaacctgctaatgaacgatgccatcttccttttggat
gaagccatacagtatttgagcaagataaaaattcaacaaattgagaaggaccgaggtgaa
tgggacagtctgactccagaagcccgccgagagaaggaggctggcctacagatgtttgga
cagctggcacgtttccataacatcatgtccaatgaaacaattggtacccttgcctttctg
acatcagagatcaaatccctctttgtgcatcctttcctggctgagcgcatcatctccatg
ctgaactacttcctgcagcacctggttggccccaagatgggggccttaaaagtcaaggac
ttcagtgaatttgacttcaaaccccagcagctcgtttcagatatctgcaccatctactta
aatcttggggatgaggagaatttctgtgccactgtgcccaaggatggacgttcctattcc
ccaactctctttgcacagacagtccgagtcctgaagaaaataaataagcctgggaatatg
attgtggctttcagcaacttagcagagagaatcaagtctctagcagacctccagcaacag
gaagaggagacctatgcagatgcctgtgatgagtttctggatcccatcatgagcacactg
atgtctgaccctgtggtgctgccgtcttccagagtcactgtggatagatccaccattgcc
agacatttgctcagtgaccaaacagatccctttaaccgtagtcccctcaccatggaccag
atccggccaaacacagaactaaaagaaaaaatccaacggtggcttgcagagaggaaacaa
caacaaaaggagcaacttgagtaa
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