Phocoena sinus (vaquita): 116757855
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Entry
116757855 CDS
T07759
Symbol
TRIM6
Name
(RefSeq) tripartite motif-containing protein 6
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116757855 (TRIM6)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116757855 (TRIM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_5
PRY
zf-C3HC4_3
zf-RING_2
zf-RING_6
RING_XB3-XBAT31
zf-RING_10
zf-Nse
TRAF3_RING
Fib_alpha
CFAP58_CC
U-box
Phg_2220_C
Motif
Other DBs
NCBI-GeneID:
116757855
NCBI-ProteinID:
XP_032496120
Ensembl:
ENSPSNG00000008858
LinkDB
All DBs
Position
8:61225468..61244924
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AA seq
553 aa
AA seq
DB search
MPRWTNQQHLLPPSPRPFLLTPFCFGGGCGSCKSSALVQDTDSRILYTRNTLEVRAGQAG
ARRVATMTSAVLVDIQDEVTCPICLELLTEPLSIDCGHSFCQACITGDSKELGIGQEEES
SCPVCQTSYQPGNLRPNRHLANIADRLREVVLGLGKQLKVVLCAHHGEKLQLFCKEDGKL
ICWLCERSQEHRGHHTFLMEEVAQEYQEKFQESLKKLRQEQQEAEKLTAVIREKRASWKN
QMEPERHRIQKQFDQLRSILDREEQRQLKKLEEEERKGLNIIAEAEGELMQQSQSLRELI
SDLERRCQGSTMELLQDVSDVAKRSELWTLKKPEALPTKLKSMFRAPDLKKMLRVFRELT
DVQSYWVDVTLNPHTANLNLVLSKNRRQVRFVGTQLSGSHLEEHYGCGVLGSRHFSSGKH
YWEVDVAKKTDWILGVCSDSTGPTFSFNQFANNRNVYSRYQPQSGYWVIGLHHKHEYRAY
EESSTSLLLSMMVPPRRIGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPC
NCVVPMTLRRPSS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctggacaaatcagcagcatctcctccccccctcgccccgcccctttctcctt
acgcctttctgctttggtggaggctgcggcagctgtaaatcctcggctctggtccaagat
acagattccaggattctatacacaagaaacaccttagaagtcagggctgggcaggccgga
gccaggagagtggctacaatgacttcagcagtcctggtggacatccaggacgaagtgacc
tgccccatctgcctggagctcctgacagaacccctgagcatagactgtggacacagcttc
tgccaagcctgcatcacgggggatagcaaggagttgggtattggccaagaagaagagagc
agctgtcctgtgtgccagaccagctaccagcctgggaacctgcggcccaatcggcacctg
gccaacatagcggacaggctcagggaggtggtgttgggcttggggaagcagctgaaggtg
gttctttgtgcgcaccatggagagaaactccagctcttctgtaaggaggatgggaagctc
atttgctggctgtgcgagaggtcccaggagcaccgaggtcaccacacgttcctcatggaa
gaggtggcccaggagtaccaggagaagttccaggagtctctgaagaagctgaggcaagag
cagcaggaagctgagaaactaacagctgttatcagagagaagagggcatcctggaagaat
cagatggaacctgagagacacaggatccagaagcagtttgatcagttgaggagcatcctg
gacagagaggagcagcggcagctgaagaagctggaggaggaggagaggaaggggctgaac
atcatcgcagaagctgagggtgagctgatgcagcagagccagtccctgagagagctcatc
tcagacctggagcgccggtgtcaggggtcaacaatggagctgctgcaggatgtgagtgat
gtcgcgaaaaggagtgagctctggaccctgaagaagccggaagctctccccaccaagctg
aagagtatgtttcgagccccagatctgaaaaagatgctgcgagtgtttagagagctgaca
gatgtccagagctactgggtggacgtgactctgaatccacacacggctaatttaaatctc
gtcctgtctaagaaccggaggcaggtgagatttgtgggcactcagctgtctgggtctcat
ctggaagagcattatggctgtggtgtcctgggctctcggcacttctcctcaggaaagcat
tactgggaggtagacgtggccaagaagactgactggatcctgggggtgtgcagtgattca
acgggacctacgttctctttcaaccagtttgcgaacaatcggaatgtttactcccgatac
cagcctcaaagtggatactgggtgattgggttacatcataagcacgaatacagagcctat
gaggaatcgtccacctccttgctcctctccatgatggtgccccctcgccgaattggggtg
ttcttagactatgaggccggcacggtctccttttacaatgtcaccaaccacggcttcccc
atctacaccttctctaagtattactttcctaccaccctatgtccatattttaatccttgc
aactgtgtagtcccgatgaccctgcgccgcccaagctcttga
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