Phocoena sinus (vaquita): 116757915
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Entry
116757915 CDS
T07759
Symbol
TSKU
Name
(RefSeq) tsukushin isoform X1
KO
K08130
tsukushi
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psiu00535
]
116757915 (TSKU)
Proteoglycans [BR:
psiu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
116757915 (TSKU)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_5
LRR_6
LRR_LRWD1
LRR_NXF1-5
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
116757915
NCBI-ProteinID:
XP_032496281
Ensembl:
ENSPSNG00000005155
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Position
8:complement(55797279..55811157)
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AA seq
353 aa
AA seq
DB search
MLWPLLLLLAAGEAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIVPVPIPLDT
AHLDLSSNRLETVNESVLAGPGYTTLAGLDLSHNLLTRFSPTAFSRLRYLESLDLSHNGL
AALPAESFTSSPLSDVNLSHNRLREVSVSAFATHSQGRALHVDLSHNLLHSLVPHPARAS
LPAPTIQSLNLAWNRLHTVPDLRDLPLRYLSLDGNPLAAIGPGAFEGLAGLTHLSLGSLQ
RLPQLVPYGFRELQGLQVLDLSSNPKLKWAGPEVFSGLGSLQELDLSGTGLVPLPEKLLL
HLPALQSISVGQGVQCRRLVREGTYPRQPGSTPKVALHCIDTQELAAGGSDTL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggcccctgctgctgttgctggccgccggtgaggcccagaccacccggccctgc
ttccctggatgccagtgtgaggtggagacctttggcctcttcgacagcttcagcctgacg
cgagtggattgcagtggcctgggccctcacatcgtgcccgtgcccatccccctggacaca
gcccacctggacctgtcctccaaccggctggagacggtgaacgagtccgtgctggcaggc
ccgggctacaccacgctggccggcctggatctcagccacaacctgctcaccaggttctcg
cccacggccttctcccgccttcgctacttggagtctcttgacctcagccacaatggcctg
gccgccctgcccgccgagagcttcaccagctcgcccctgagcgacgtgaacctgagccac
aaccggctccgcgaggtctccgtgtccgccttcgccacccacagccagggcagggcgctg
cacgtggacctctcgcacaacctcctccacagcctcgtgccccaccccgcgcgggccagc
ctgccggcgcccaccattcagagcctgaacctggcctggaaccggctccacaccgtgccc
gacctccgggacttgcccctgcgctacctgagcttggacgggaacccactggcggccatt
ggcccaggggccttcgaggggctggcgggccttacacacctgtcgctgggcagcctgcag
cgtctcccccagctggtgccctatggcttccgtgagctgcagggcctgcaggtcctggat
ttgtcaagcaaccccaagctcaagtgggcaggacccgaggtgttctcaggcctgggctcc
ctgcaggagctggacctgtcaggcacgggcctggtgcccctgcccgagaagctgcttctc
cacctcccggcgctgcagagcatcagcgtgggccagggcgtgcagtgccggcgcctggtg
cgggagggcacctaccccaggcagcctggctccacccccaaggtggccctgcactgcata
gacacccaggaattagctgctgggggctctgataccttgtga
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