Phocoena sinus (vaquita): 116757938
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Entry
116757938 CDS
T07759
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116757938 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116757938 (NFRKB)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
116757938 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
116757938
NCBI-ProteinID:
XP_032496338
Ensembl:
ENSPSNG00000004123
UniProt:
A0A8C9DYY5
LinkDB
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Position
8:4453230..4489137
Genome browser
AA seq
1296 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSFSTWQE
VLSASQREHLQQFLPRFPEDSTEQQDELILALFRGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFRSQYKRYLSSQQQYFHRLLKQILASRSDLLEMARRSGPALPSRQKRPSPSRT
PEEREWRTQQRYLKVLREVKEECGDSALSSDEEDLSSWLPSSPARSPSPVVPLRVVPTLS
TTDMKTADKIELGDSDLKIMLKKHHEKRKHQPDHPDLLTGDLTLNDIMTRVNAGRKGSLA
ALYDLAVLKKKVKEKEERKKKKIKMIKSEAEDLAEPLSGTEGLPALSQAPSPLAIPAIKE
EPLEDLKPCLGINEISSSFFSLLLEILLLEGQASLPMLEERVLDWQSSPASSLNSWFSAA
PNWAELVLPALQYLAGESRAVPSSFSPFVGFKEKTQQWKLLGQSQDNEKELAALFQLWLE
TKDQAFCKQENEDSSDATTPVPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRM
HGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEI
CELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFE
RIHQAQAAAAKARKALQQKPKPPSKVKSSSKEGSVKVLGAGPSEQSQLSLSDSSMPPTPV
TPVTPTTPALPATPISPPPVPSVNKSGPTTVSEPVKSTSGVLLVSSPTMPQLGTMLSPAS
SQTPPSSQAAARVVSHSGSAGLPQVRVVAQPSLPAVTQSAGPAPTLPQMTAGPQIRVPAT
AVQAKGGPQTVMATVPVKAQTAAATVQRPGPAGLTVTSLPATVNPASKPATSSPGGSAPS
TPAAAVIQNVTGQNIIKQVAITGQLGVKPQTGSSIPLTATNFRIQGKDVLRLPPSSITTD
AKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGPTGKGISATLHVTSNPVHPADSP
AKASPASAPSSTPPGTTVVKVTPDLKPTEASSSAFRLMPALGVSVADQKGKNTVASSEAK
PAATIRIVQGLGVMPPKAGPTITVAAHAKQGPSVASGSGTVHTSAVSLPSVNAAVSKTVA
VASGASSTPISIGTGAPAVRQVPVSTTVVSTSQAGKLPTRITVPLSVISQPMKGKGVVTA
PIIKGNLGANLGGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQT
VPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggaccatatgctgacggatcccttggagctgggcccgtgtggagatggc
cacggcacgcggatcatggaggactgcctcctggggggcactagggttagtctgcccgag
gaccttctggaggatcccgagatcttctttgacgtagtcagcttctcaacgtggcaggaa
gtactgagcgcctcgcagcgcgagcacctccagcagtttctgccccgctttcctgaggac
agtactgagcagcaggatgagctcatcctcgccctgttccgtggggagaacttccgcttc
ggaaaccctctgcacatcgcccagaagcttttccgagatggacacttcaaccccgaggtg
gtcaagtataggcagctgtgcttccggtcgcagtacaaacgctacctcagctcccagcag
cagtacttccaccggctgctgaagcagatcctggcctcgcggagcgatctcctggagatg
gcccggcgaagcggtcccgccctcccctcccggcagaagcgcccctcaccatcccgcacc
cccgaggagcgggagtggcgcacccagcagcgctacctgaaggtcctgcgggaagtgaag
gaggagtgtggggactcggccctgtcatcggacgaggaggatctcagctcgtggctcccg
agctctccagcgcgctctcctagccctgtggtgcccctcagggtggtgcccacgctttcc
accacggacatgaagactgcagataaaatagaactgggggacagtgacctgaagataatg
ctaaagaagcaccatgagaagcggaaacaccaaccagatcacccagaccttttgacgggg
gacctgactctcaatgacatcatgactcgagtaaatgccggcaggaagggctctctagca
gcactatatgacttggctgtccttaaaaaaaaggttaaggaaaaagaggaaaggaagaag
aagaaaataaaaatgatcaaatcagaggcagaggatctggcggaacccctaagcggtact
gaaggtctcccagccctctcacaggcaccgtctccactggccatacccgctatcaaggag
gagcctctcgaagacctcaagccttgccttggaatcaatgaaatatcttccagcttcttc
tctcttctcttggagatcttgttgctggaggggcaggctagccttcctatgctagaggag
cgagttttggactggcagtcgtctccagccagctccctcaatagctggttctctgcggcc
cccaactgggcagagttggtgttaccagccctgcagtatcttgctggagaaagccgtgct
gtaccttccagcttctctccatttgttggcttcaaagagaaaacccagcagtggaagttg
cttggccagtcccaagataatgaaaaggagttagctgcactcttccagctgtggctggaa
actaaagaccaggccttctgtaagcaagaaaatgaagacagctcagatgccacaacgcct
gttcctcgggtaagaactgactatgtggtgcggcccagcacgggagaggagaagcgagtt
tttcaggagcaggagcgttaccggtacagccagccccacaaggcattcaccttccgcatg
catggcttcgagtccgtggtggggcccgtgaagggtgtgttcgacaaggagacatcgctc
aacaaggcgcgggaacactccctgctgcgctccgaccggcccgcctacgtcaccatcctg
tccctggttcgcgacgcggcggcccggctgcccaacggggagggcacgcgggcggagatc
tgcgagctgctcaaggactcccagttcctggctccagacgtcaccagcactcaggtgaat
acagtggtgagtggtgccctggatcggctgcattacgagaaggacccgtgtgtgaagtac
gacatcggacggaagttgtggatctacctgcatcgggaccggagcgaggaagagttcgag
cggatccaccaggcccaagcagctgcagctaaagccaggaaagcccttcagcaaaaaccc
aagcccccatccaaggtgaagtccagcagcaaggagggttcggtgaaggtcctcggcgct
ggcccttccgagcagagccagctgagcctcagcgactccagcatgccccccaccccagtc
acgcctgtgacccccaccactcctgctctgcccgccacgcccatctcccccccgcctgtg
ccgtcagtgaacaaaagtggccccacgactgtctcggaacccgtgaaatccacttcaggt
gttcttctcgtgtcttcgccaacgatgccacagctgggaaccatgctctccccagcgtcc
agccagactccaccgagttctcaggctgctgcccgtgtcgtgagccactccggctcggct
ggactcccccaagtgcgggtggtggcccagcccagccttcctgctgtgactcagtcagcg
gggccggcaccgacgctgccacagatgacagcaggaccacagattcgcgtgccggccacg
gccgtgcaggccaaaggcgggccccagacagtaatggccaccgttccagtcaaagctcag
actgcggcggccaccgtgcagcgaccggggccggcggggctcacagtgacaagtctccct
gccacagtcaaccctgcgagcaagccggccaccagttctcctgggggctctgctccaagc
acccccgcggctgccgtcattcagaacgtcacaggacagaacattatcaagcaggtggca
atcactgggcagctcggcgtgaagccccagacgggcagcagcatccctctcacagccact
aacttccgtatccagggcaaggacgtgctgcggctaccgccctcctccatcaccacggac
gccaaaggccagactgttctgcggatcactccagacatgatggccacgttggccaagtcc
caggtcaccacagtcaaactgacccaggacctgtttgggacaggcagcggccccacaggc
aaaggcatctccgctaccttacacgtcacttccaacccagtccacccagctgacagccct
gccaaggccagtccagccagtgccccctcatccactccaccagggaccactgtagtcaaa
gtgactcctgacctcaagccaacagaagcctcaagttcagcttttcgcttgatgccagcg
cttggcgtgagtgtggctgaccagaaggggaaaaacacagtggcctcatctgaagccaaa
ccagccgccaccatccgcatcgtgcagggcctgggggtgatgccccccaaagcaggcccg
accatcacggtcgcagcccatgccaagcaagggccctccgtggccagtgggtctggaact
gtccatacgtccgcggtgtccttgcccagtgtgaacgctgccgtgtccaagactgtggcc
gtggcttctggagcttccagcacccccatcagcatcgggacgggagcccctgctgtgcgg
caggtccctgtcagcaccacggttgtttccacgtcccaggctgggaagctgcctacgcgg
atcacagttccactctctgtcattagccagcccatgaagggcaagggtgtggtcacagcc
cccatcatcaaaggcaaccttggagccaaccttggcgggctgggccgcaacatcatcctc
accaccatgccagcaggcacgaagctcattgccggcaacaagccggttagtttcctcacc
gcccagcagttgcagcagctccagcagcagggtcaggccacacaggtgcgcatccagact
gtccccgcgtcccaccttcaacaaggaacagcttctggttcctccaaagccgtctccacg
gtcgtcgtgaccacggccccatctcctaaacaggcacctgaacagcagtga
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