Phocoena sinus (vaquita): 116758000
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Entry
116758000 CDS
T07759
Symbol
RNF169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116758000 (RNF169)
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116758000 (RNF169)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
116758000 (RNF169)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
116758000 (RNF169)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
116758000 (RNF169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_10
RING_XB3-XBAT31
zf-RING_4
Prok-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
116758000
NCBI-ProteinID:
XP_032496469
Ensembl:
ENSPSNG00000007029
UniProt:
A0A8C9BQ10
LinkDB
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Position
8:complement(57550055..57644100)
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AA seq
708 aa
AA seq
DB search
MAAAGPSTRASSAAAAAALNRRGRRGRCDEMAAAKTGTPGPASGPALLVLPPPLLQPPPP
PRPEESDCAGCLETPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARD
NWQPDAEVLGERARRGPPERCRPRRDGGAAATGPRPEQETRGAPAEPEFIFRAPIKLSKP
GELREEYESLRKLREEKLQEEKTSEDQIHRLLPEDTEMGKRKMDEQKKRDEPLVLKTNLE
RCPARLSDSENEEPSRGKMIQTHRSAFVSKNNSYSLSFLAGNLNSKMERSQSCSDTGQDR
VKGRLRAAPTSKAKVTTMTPASNPIIGVLLSTQNNRCLSAPDLTIEKRLPFSSLSSLASL
HKPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQK
QTSYEASPRILKKWEQIFQERQIKKTLSKATLTSLAPETGEDLLVTEVTHSSKEKPLLAL
NTRLSSGQVLSEYTGPTPTDLDYFPSASQTKAEQGSDSKRSTEIPLETCCSSELKVGASG
TSLEREQFEGSGSSPDAKLDKTCITTAMKISAVSSVLPKNSVLGGVLKTKKQLKTVNHFD
LPNGVLADSLGEEPLPSLRRGRKRRCKTKHLEQNGSLKKLRQSSGEVGLAPADPVLREME
QKLQQEEEDRQLALQLQRMFDNERRTVSRRKGSVDQYLLRSSSMAGAK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcaggtccgagcactcgggcctcttccgcggcggcagcggcagctctgaat
cggcggggtcggcggggccgctgtgacgagatggcggcagccaagactgggaccccgggc
ccggcctctggccccgcgctgctggtgttgccgccgccgttgctgcagccgccgccaccg
ccgcggccagaggagtcggactgcgctgggtgcctggagaccccgggggaagcggcggcc
ctgccgtgcggccactcgctgtgccgaggctgcgcccaacgcgccgccgacgcggcgggc
ccgggttgcccgcgctgccgcgcccgcggcccgggctgggcccgccgtcgggcccgcgac
aactggcagcccgacgcggaggtgctgggcgagcgcgcccgccgcggcccacccgagcgc
tgccgcccgcgtcgtgacgggggcgcggccgccacggggcccaggcccgagcaggagacg
cgcggcgcgccagcggagccagagtttatattcagagcaccaatcaaattaagcaagcct
ggggaacttcgtgaggaatatgaaagcctgagaaagctgagagaagaaaagttacaagag
gagaaaacctctgaagatcaaatccacaggctgttaccagaggatacagaaatgggaaaa
aggaaaatggatgaacagaaaaaaagagatgagccattagtactgaagacaaatctggag
cgttgtcctgcacgtctctcagattcagagaatgaagaaccttctcgaggcaagatgata
cagacacaccgctcggcatttgtttccaagaacaactcctactccttatctttcctggca
gggaacctaaattccaagatggaaaggagtcagagctgcagtgacactggtcaggacaga
gtgaagggcagactgagagcagccccaaccagcaaagccaaggtcacaaccatgacccca
gcctccaaccctatcattggtgtcctcttgtccacccaaaacaaccgctgcctctcagcc
cctgacttaaccattgaaaagcgtctgcccttcagctccctctcatccttggcttccttg
cataagccagagcgctccatcagccctgagagcaacgacagcatctccgaagaactaaac
catttcaagcccattgtctgctcaccatgtactcctcccaagagactccctgatggccgt
gtactgagtcccctcatcatcaaatcaacaccccgcaacctaaacagaagcctgcagaag
cagacttcttatgaggccagtccacggatcctcaaaaagtgggaacagatctttcaggag
cggcagatcaaaaagaccctttcgaaagccaccctcacctccctggctccagaaacaggg
gaagacttactcgtcactgaagttacccattctagcaaggagaagccacttctggcttta
aatacaagactgtccagtgggcaagtactctctgagtatacaggacctacccccactgac
cttgattatttcccctctgctagccagacaaaagcagagcagggcagtgacagtaaaagg
agcactgagatcccattagaaacctgctgttcttcagaactcaaagtgggagccagtggg
acttctttggagagagagcagtttgaagggtcagggtcatccccagatgccaagttagat
aaaacctgtataacaacagctatgaaaatctcagcagttagttcagtgctacctaagaac
agtgttttgggcggggtcctcaaaacaaagaaacagctgaagacagtgaatcattttgat
ctgcctaatggtgttctggcagacagcctaggtgaggagccacttccttccttgcgtcgg
ggcaggaaaagacgctgtaagaccaagcacttggaacaaaatggctcccttaagaaactg
cgacaaagcagtggtgaggtgggtctagccccagcagacccagtactgcgagagatggag
cagaaattgcagcaagaggaagaggaccggcagctcgctctgcagttgcagcgcatgttt
gacaatgaaaggcggactgtgagtcggcgaaaaggaagcgtggatcagtacctcttgcgg
tccagtagcatggctggggccaagtag
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