KEGG   Phocoena sinus (vaquita): 116758001
Entry
116758001         CDS       T07759                                 
Symbol
POLD3
Name
(RefSeq) DNA polymerase delta subunit 3
  KO
K03504  DNA polymerase delta subunit 3
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03030  DNA replication
psiu03410  Base excision repair
psiu03420  Nucleotide excision repair
psiu03430  Mismatch repair
psiu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116758001 (POLD3)
   03410 Base excision repair
    116758001 (POLD3)
   03420 Nucleotide excision repair
    116758001 (POLD3)
   03430 Mismatch repair
    116758001 (POLD3)
   03440 Homologous recombination
    116758001 (POLD3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psiu01009]
    116758001 (POLD3)
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psiu03032]
    116758001 (POLD3)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116758001 (POLD3)
Protein phosphatases and associated proteins [BR:psiu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116758001 (POLD3)
DNA replication proteins [BR:psiu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    116758001 (POLD3)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      116758001 (POLD3)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     116758001 (POLD3)
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 116758001
NCBI-ProteinID: XP_032496470
Ensembl: ENSPSNG00000007123
UniProt: A0A8C9BMV2
LinkDB
Position
8:complement(57743138..57786356)
AA seq 464 aa
MADQFYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVT
YLVSGSLIQNGHSCHKVAVVREDKLEAVKSKLAVTASVHVYSIQKAMLKDSGPLFNTDYD
ILKSNLQNCSKFSAIQCAAAVPRAPAESSSFEKFEQSDLPVSPEPQASNELTTNGHGPPI
PKQSSQQPKGIMGMFASKAASKTQDANKETKTEAKEVTNASSVGNKPTGKGNAISNFFGK
AAMNKIKVNLDSEQAVKEEKIVEQPPLSVTEPKLAAPVGLKKSSKKAEPVKMQQKENKRK
QVEVADDETKETENMKKKRRRIKLPESDSSEDEVIPDSPGAHEAESPSPPPPASPSPEPV
PKTEPEPPSVKGSSGENKRKRKRVLKSKAFVDEEGCIVTEKVYESESCTDSEEELKMKTS
SVHRPPTMTLKKEPKEERKGPKKGTAALGKANRQVSITGFFQRK
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcggaccagttttatctggaaaatatagacgagttcgtcacggaccagaacaagata
gtgacatacaaatggctgagctatacactaggagttcatgttaatcaggccaaacagatg
ctgtatgattatgttgaaaggaagcgaaaggaaaattcaggagcccaactgcatgtcact
tatttagtgtctggcagtctcattcagaatggacattcctgccacaaggttgcagtagtg
agagaagataaattggaagcagtgaagtccaagctagctgtgactgccagtgtacatgtg
tacagcatccagaaagccatgctaaaggacagtgggcctctgttcaataccgactatgac
atccttaaaagcaacttgcagaactgcagcaagtttagtgccatccagtgtgcagctgcc
gtccctagagctcctgctgaatcctcatcttttgaaaagtttgagcagtcagatcttcca
gtatcacctgagccacaagctagtaatgagttgaccaccaatggtcatggcccacctatc
cccaaacagagttcccagcagcccaaaggaatcatgggcatgtttgcttctaaagctgct
tctaaaacccaagatgccaacaaggaaaccaaaacagaggctaaagaagtaacgaatgca
tcttcggtaggcaacaagccaacagggaaagggaatgcgataagcaatttttttggaaaa
gctgctatgaataaaattaaagtcaatttggattcagaacaagcagtgaaagaagaaaaa
atagtggagcaacctccactgtctgtcactgaaccaaagctggcagcccctgtgggcctg
aagaaatctagcaaaaaagcagagcctgttaagatgcagcagaaggaaaataaaaggaag
caagtggaggtagctgatgatgagacaaaagaaactgaaaacatgaagaaaaagaggaga
agaatcaaacttcctgagtctgatagcagtgaagatgaagtcataccagactctcctggg
gctcatgaagctgagtcaccatccccacctcctcctgcttctccatctcctgaaccagtg
ccgaagactgagccagagcctccttctgtcaagggctcaagtggagaaaacaaaagaaaa
cgaaaacgtgtgctaaaatctaaagcctttgtggacgaggagggctgcatagtaactgaa
aaggtctacgagagtgaatcctgcacagatagtgaagaagagcttaagatgaagacttcc
tctgtacataggcctcccaccatgactctgaaaaaggaacccaaagaggaacgaaagggc
ccaaagaaaggaactgctgctctgggcaaagccaatagacaagtgtccattactggcttc
ttccagaggaagtga

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