KEGG   Phocoena sinus (vaquita): 116758091
Entry
116758091         CDS       T07759                                 
Symbol
SF3B2
Name
(RefSeq) splicing factor 3B subunit 2 isoform X1
  KO
K12829  splicing factor 3B subunit 2
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116758091 (SF3B2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psiu03041]
    116758091 (SF3B2)
Spliceosome [BR:psiu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116758091 (SF3B2)
 Complex B
    116758091 (SF3B2)
 Complex C
   U2 SnRNP specific factors
    116758091 (SF3B2)
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 116758091
NCBI-ProteinID: XP_032496638
Ensembl: ENSPSNG00000013009
LinkDB
Position
8:103874875..103888633
AA seq 949 aa
MAAEHPEPPKGELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGEEHGRSRAGKCRPAG
KRSCLPRRLGGGGGGWPRGPDLGLLRLTYPIDPVLCPAGTREELVERLQTYTRQTGIVLN
RPVLRGEDGDKAAPPPMSAQLSGIPMPPPPMGLPPLQPPPPPPPPPPGLGLGFPMAVGPR
PPNLGPPPPLRVGEPVSLSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQQKR
AAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPTPTVLPMGAPVPRP
RGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQDEEEMETDTRSSLGH
SASETEEDTVSISKKEKNRKRRNRKKKKKPQRVRGASSESSGDRDKESGRSRGSDSPAAD
VEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPKKKGFEE
EHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQDPK
LLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEKEEQ
KTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKEKKP
GDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSFGYH
AGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSEEEEEEE
SDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSETPQLFTV
LPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAMTQKYEE
HVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggcggccgagcatcccgaaccccctaaaggggagttgcagctgccgccgccgccgccc
cctgggcactatggtgcctgggctgcccaggagcttcaggccaaattagcagagatcggg
gctccgatccagggtgaggagcacgggaggtcaagagcgggaaagtgcaggcctgcgggg
aagcggagctgtttaccccggagactcgggggcgggggtggaggctggccgcgggggcct
gacttgggcctgctccgcctgacctaccccattgatcctgtgctttgcccagcagggact
cgcgaggagctggtggagcggctgcagacctacacccgccagactggcatcgtcctgaat
cggcccgttctgagaggtgaagatggggacaaagctgctccccctcctatgtcagctcag
ctctctgggattcccatgccacccccccccatgggactccctcctctgcaacctcctccg
ccacccccaccacccccacccggccttggccttggctttcctatggcagttggaccccgc
ccaccaaacctggggccccctcctcctctccgggtgggcgagcccgtgtcgctgtcagag
gaagagcggctaaagctggcgcagcagcaggcggcgttgctgatgcagcaggaggagcgt
gccaagcagcagggagatcattcactgaaggaacatgaacttttggagcagcagaagcgg
gcagctgtgttactggagcaggaacggcagcaggagattgccaagatgggcacgccagtc
cctcggcccccgcaagacatgggccaaattggtgttcgcactcctctgggtcctcgagtg
gctgctccagtgggtcccactcccactgtcctgcctatgggggcccctgttcctcggcct
cgtggtcccccaccacctcctggagatgagaacagagagatggatgacccctctgtgggc
cccaagatcccccaggctttggaaaagatccttcagctaaaggagagccgccaggaagag
atgaactctcagcaggacgaagaggaaatggagacagatactcgctcgtccctgggccac
tcggcgtcagagactgaggaggacacagtgtccatatctaaaaaagagaaaaaccggaag
cgtcggaaccgaaagaagaagaaaaagccccagcgggtgcggggggcatcatctgagagc
tctggggaccgagacaaagagtcaggccgctcccgtggctctgactccccagcggctgat
gtggaaattgagtacgtgactgaagagcctgaaatttatgagcccaacttcatcttcttc
aagaggatttttgaggctttcaagctcactgatgacgtgaagaaggagaaggagaaggag
ccagagaaacttgacaaactggagaactctgcggcccccaagaagaagggctttgaggag
gagcacaaggacagcgatgatgatagcagtgatgacgagcaggaaaagaagccagaagcc
cccaagctgtccaagaagaagctgcgccgaatgaatcgcttcactgtggctgaactcaag
cagcttgtggctcggcccgacgttgtggagatgcatgacgtgactgcgcaggaccccaag
ctcttggttcacctcaaggccactcggaattctgtgcccgtgcctcgccactggtgtttt
aagcgcaagtacctgcagggcaaacgaggcattgagaagccccccttcgagctacccgac
ttcatcaaacgcacaggcatccaggagatgcgggaggccctgcaggagaaggaagaacag
aaaaccatgaagtcaaaaatgcgcgagaaggttcggcccaagatggggaagatcgacatt
gactaccagaaactgcatgacgccttcttcaagtggcagaccaagccaaagctgaccatc
catggggacctgtactacgaggggaaggagtttgagacacgactgaaggagaagaagcca
ggagatctgtctgatgagctgaggatttccttggggatgccagtaggaccaaatgcccac
aaggtccctcccccgtggctgattgccatgcagcgatatggaccacccccgtcgtacccc
aacctgaaaatccctgggctgaactctcctatccccgaaagctgttcctttgggtaccat
gctggtggctggggcaaacccccagtagatgagactgggaaacccctctatggggatgtg
tttggaaccaatgctgctgaatttcagaccaagactgaggaagaagagattgatcggacc
ccttggggggagctggagccatctgatgaagagtcttcagaagaagaggaagaggaagaa
agtgatgaagataagccagatgagacgggcttcattacccctgcagacagtggcctcatc
actcctggagggttctcatcagtgccagctggaatggagacccctgaactcattgaactg
aggaagaagaagattgaggaggcgatggatggaagtgagacgcctcagctgttcaccgtg
ttgccagagaagagaacggccactgttgggggcgccatgatgggatcaacccacatctat
gacatgtccacggttatgagccggaagggcccggcccccgagctacaaggtgtagaagtg
gccctggcacccgaagagctggagctggatcccatggccatgacccagaagtatgaggag
cacgtgcgggagcagcaggcacaagtggagaaagaagacttcagtgacatggtggctgag
cacgcggccaagcagaagcaaaagaaacggaaagctcagccccaggacagccgtgggggc
agcaagaaatacaaggagttcaaattttag

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