Phocoena sinus (vaquita): 116758119
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Entry
116758119 CDS
T07759
Symbol
FAF1
Name
(RefSeq) FAS-associated factor 1
KO
K20703
FAS-associated factor 1
Organism
psiu
Phocoena sinus (vaquita)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAF1
UBX
UBA_4
UBA_8
OTU1_UBXL
TarS_C2
Motif
Other DBs
NCBI-GeneID:
116758119
NCBI-ProteinID:
XP_032496704
Ensembl:
ENSPSNG00000010473
UniProt:
A0A8C9E346
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Position
1:complement(42088823..42581387)
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AA seq
654 aa
AA seq
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MASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILRSDYGGEP
ISGPAFDPASHPAPAPAPAPSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDS
CTVGEIKQILENELQIPVSKMLLKGWKTGDVEDSMVLKSLHLPKNNSLYVLTPDLPPPSS
SSHAGPFSALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQL
WEGWPTSATDDSMCLAESGLSYPCHRLTVGRRSSPAQTREQSEEQSTDVHMVSDSDGDDF
EDASEFGVDDGEVFGMASSALRKSPMMPENAENEGDALLQFTAEFSSRYGDCHPVFFIGS
LEATFQEAFYVKARDRKLLAVYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLT
KDANRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDEL
MMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLSLEADRAKREAHEREMAEQ
FRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFLERRFLASNKL
QIVFDFVASKGFPWDEFKLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLEAKE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacatggaccgagagatgatcctggcagattttcaggcatgtactggcatt
gaaaacattgatgaagctattacgttgcttgaacaaaataattgggacttagtggcagct
atcaatggtgtaataccccaggaaaatggcattctgagaagtgactatgggggtgagcct
atatcaggacctgcatttgatccagcaagtcacccagctccagctcctgctcctgctccc
tcttcttcagcatttcgacctgtaatgccatctaggcaaattgtagaaaggcaacctcgg
atgctggacttcagggttgagtacagagacagaaatgttgatgtggtacttgaagacagc
tgtaccgttggagaaattaaacagattctagaaaatgaacttcagatacctgtgtctaaa
atgctgttaaaaggctggaagactggagatgtggaagacagtatggtcttaaaatcacta
cacttgccaaaaaacaacagtctttatgttcttacaccagatttgccaccaccttcatca
tctagtcatgctggccctttcagtgccctgcaggagtcattaaatcaaaacttcatgctg
atcatcacccaccgagaagtccagcgggagtacaacctgaacttctcaggaagcagtacc
attcaagaggtaaagagaaatgtgtatgaccttacgagtatccctgttcgccatcagtta
tgggagggctggccaacttctgccacagatgactccatgtgtcttgctgaatcagggctt
tcatatccgtgccatcgacttacagtgggaagaagatcttcacctgcacagacccgggag
caatccgaagagcaaagcaccgatgttcatatggttagtgatagtgatggagatgacttt
gaagatgcctccgaatttggggtggatgatggagaagtattcggcatggcttcatctgcc
ttgaggaaatctccaatgatgccagaaaacgcagaaaatgaaggagatgccttattacaa
tttacagcagagttttcttcaagatatggtgactgccatcctgtattttttattggctca
ttagaagcaacttttcaagaggccttctatgtgaaagcccgagatagaaagcttcttgct
gtctacctccaccacgatgaaagtgtattaaccaacgtgttctgctcacaaatgctttgt
gctgaatctatcgtctcttatctgagtcaaaattttataacctgggcttgggacctgaca
aaggacgccaacagagcaagatttctgacgatgtgcaatagacactttggcagcgttgtt
gcacaaaccattcggactcaaaaaacagatcagtttccactttttctgattattatggga
aagcgatcatctaatgaagtgttaaatgtgatacaaggtaacacaacagtggatgagtta
atgatgagactcatggctgcaatggagatcttcacggcccagcaacaggaagatataaag
gatgaggacgaacgagaagccagagaaaatgtgaagagagaacaagacgaggcctatcgc
ctttcacttgaggctgacagagcaaagagggaagctcatgagagagagatggcagaacag
tttcgtttggaacagattcgcaaagaacaagaagaggaacgtgaggccatcagactctcc
ttagagcaggccctgcctccagagccaaaggaagaaaatgctgagcctgtgagcaaactg
cggatccggacacccagtggcgagttcctcgagcggcgtttcctggccagcaataagctc
cagatcgtctttgattttgtagcttccaaaggatttccatgggatgaattcaagttactg
agtacctttcctaggagagatgtaacccagctggacccaaataaatcattattggaggta
aagttgttccctcaagaaacccttttccttgaagcaaaagagtaa
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