Phocoena sinus (vaquita): 116758139
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Entry
116758139 CDS
T07759
Symbol
NPAS4
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116758139 (NPAS4)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116758139 (NPAS4)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
116758139
NCBI-ProteinID:
XP_032496749
Ensembl:
ENSPSNG00000007839
UniProt:
A0A8C9E1C7
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Position
8:104159679..104165311
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AA seq
798 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGT
PLAGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIY
DIIDPADHLTVRQQLTLPSALDNDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGA
YWAGNPVFTAFCAPLETRPRPGPGPGPGPGPASLFLAMFQSHHAKDLALLDISESVLIYL
GFERSELLCKSWYGLLHPEDLGHASAQHYRLLAESGDIQAEMVVRLLAKPGGWAWIYCLL
YSEGPEGPITANNYPISDTEAWSLRQQLNSEETQAAYVLGTPTMLPSFPESILSQEQCSG
PNPLFTMGPPRSTNFPSAPELGAVSTPEELPRPPKEVGFSYLTFPSGPEPSLQADLSKDL
VCTPPYTPRQPGGCAFLFSLHEPFQTHLPTPSSSLQEQLTPSTVTFSDQLTPSSATFPDP
LTSPLQGQLTETSARSYEDPCTSTFPDQLLPGTATFPEPLNSPAHEQVTSPSTAFQAHLN
SPSQTFPEQLSPNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSVDVP
LVPEGLLTPEASPVKQSFFHYSEKEQNEIDRLIQQISQLAQGMDRPFSAEAGTGGLEPLG
GLEPLDPNLSLAGAGPPVLSLDLKPWKCQDLDFLTDPDIFLEETPVEDIFMDLSTPDPNG
EWSSEDPEAAVPGGAPSPRNNLSPEDSSFLEDLATYETAFETGVSAFPYDGFTDELHQLQ
SQVQDSFHEDGSGGEPTF
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgctccaccaagggcgcctccaaggcgcgccgcgaccagatcaacgctgagatc
cggaacctcaaggagctgctgccgctggccgaagcggacaaggtccggctgtcctacctg
cacattatgagtcttgcctgcatctacactcgcaagggcgtcttcttcgctggaggcact
cctctggcgggccccacagggctcctctcagctcaagagcttgaagacatagtggcagca
ctacctggattcctgcttgtgttcacggcggaggggaagctgctatatctctctgagagt
gtgagcgagcatctgggccactccatggtggacctggttgcccagggtgacagtatctac
gacatcattgacccagctgaccacctaactgtgcgccagcaactcaccctgccctctgct
ctggataatgatcgcctcttccgctgtcgcttcaacacctccaagtccctcaggcgccag
agtgcaggcaacaaactggtgcttattcgaggccgattccacgctcacccacctggggcc
tactgggcaggaaatcctgtgttcacagctttctgtgctccactggagacaagaccccgc
cctggccctggccctggccctggtcctggccctgcctcacttttcttggccatgttccag
agccatcacgctaaggacctggccctgctggacatctcagagagtgtcctaatctacctg
ggctttgagcgcagtgaactgctctgtaaatcatggtatggactgctgcaccctgaggac
ttgggccacgcttctgctcaacactaccgcctgttggctgagagtggagatattcaagca
gagatggtggtgagactgctggccaagcctggaggctgggcgtggatttattgcctttta
tattcagaaggtccggagggtcccattaccgccaataactacccaatcagtgacacggaa
gcctggagcctccgccagcagttaaactctgaagaaacccaggcagcctatgtcctgggc
accccgactatgctgccctcattcccggagagcatcctctcacaggagcaatgctctggt
cctaatccactcttcaccatggggcctccccgaagcaccaatttccccagtgctcctgag
ctgggtgctgtctcaacaccagaagagcttccccgaccccccaaagaggttggcttcagt
tacctgacattcccatctggccctgagccttctcttcaagcagacctgagcaaggatctt
gtgtgcaccccaccctacacgccccgccagccgggaggctgtgccttcctcttcagcctc
catgagcccttccagacccacttgcccactccgtccagctctctccaagaacagctgact
ccgagcactgtgaccttctctgatcaattgacgcccagcagtgcaactttcccagatcca
ctgactagcccactacaaggccaactgaccgaaacctcagccagaagctatgaagatcct
tgcacctccactttcccagatcagctgcttcccggcactgccaccttcccagagcctctg
aacagccctgcccacgagcaggtgacttctccaagcacagcgttccaagcacacctgaac
agccccagccaaactttcccagagcaactgagccctaatcccaccaagacttacttcgcc
caggagggatgcagttttctctatgagaagttgcccccaagtcctagcagccctggtaat
ggggactgcacactcctggccctagcccagctccggggccccctctctgtggacgtcccc
ctggtgcccgaaggcctgctcacacctgaggcctctccagtcaagcagagcttcttccac
tattcggagaaggagcagaatgagatagaccgtctcatccagcagatcagccagttggct
cagggcatggacaggcccttctcagcagaggctggcacgggtgggctagagccacttggc
gggctggagcccctggaccctaacctttccctggcaggagctggcccccctgtgctcagc
ctggacctgaaaccctggaaatgccaggacctggatttcctgactgaccctgatatattc
ctggaagagacgcccgtggaagacatcttcatggatctctctaccccagaccccaatggg
gaatggagttcagaggatcctgaggcagcagtcccaggaggggccccatcacctcgcaac
aacctgtccccagaagatagcagcttcctggaggacctggccacatacgaaaccgccttt
gagacaggtgtctcagcattcccctatgatgggtttactgatgagttgcatcaactccag
agccaagttcaagacagcttccatgaagatggaagtggaggggaaccaacgttttga
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