Phocoena sinus (vaquita): 116758159
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Entry
116758159 CDS
T07759
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04136
Autophagy - other
psiu04140
Autophagy - animal
psiu05010
Alzheimer disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116758159 (ATG2A)
04136 Autophagy - other
116758159 (ATG2A)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116758159 (ATG2A)
05014 Amyotrophic lateral sclerosis
116758159 (ATG2A)
05016 Huntington disease
116758159 (ATG2A)
05017 Spinocerebellar ataxia
116758159 (ATG2A)
05022 Pathways of neurodegeneration - multiple diseases
116758159 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116758159 (ATG2A)
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116758159 (ATG2A)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116758159 (ATG2A)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116758159 (ATG2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
116758159
NCBI-ProteinID:
XP_032496782
Ensembl:
ENSPSNG00000007230
LinkDB
All DBs
Position
8:complement(102969152..102989662)
Genome browser
AA seq
1928 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLHHYLGHFFQEHLSLDQLSLDLYKGSVVLRDIHLEIWSVN
EVLESMESPLELVEGFVGSIEVAVPWAALLTDHCTVHVSGLQLTLQPRQGPGPGAADSQS
WASCMTTSMQLAQECLRDGLPEPSEPPQPLEGLEMFAQTIETVLRRIKVTFLDTVVRVEH
PPGAGERGVAVEAHVQRLEYCDEAVRDPSQAPPVDVHQPPAFLHKLLQLAGVRLHFEELR
PQEGPPEPPLQIGSCSGCLELTVKLKQNEAFPGPKLEVCGQLGSLHLLLTPRQLQQLQEL
LGALSLADPEGLVDKLNKSRPLGADDLWLIEQDLNQQLQAGTVAEPLGSDPLSNPLVNLE
STDLFFSMAGLTSSVASALSELSLSDVDLGTSVHSNMASRQLSAQGPPTGKTAPAPPSNT
LRPDSLLKMTLGGVTLTLLQTSAPSSGPPDLTTHFFAEFDATKDGSFGSHDFYHLRPRFQ
RACPCSHVRLTGAAVQLSWELRTSRGRRITSTEVHFGQLEVLECLWPRGTPEPEYTEVLS
FPSGLRSQASVQPCAHLRHTQTLRRLPKSRPRRPTACHCHSELALDLADFQADVELGALD
RLAALLYQATTPPPEQPAGLLTEPPPAAEQHAVVRLSAPRATLQLRFPIADLRPERDPWV
GGAVRAEQLRLELTEPQFRSELSSGPGPPAPTRLELSCSDLHVTYEDGEKPPVPCLRVSK
ALDPKSPGHKYFLPQVVVTLNPQLGAQWEVTPEKGEELELSAENLCELREPEPSPFSSKR
TMYETEEMVIPGDPEEMRTFQSRALALSRCSLEVVLPGAHVFLPSKEVYESLYNRINNDL
LMWEPADLLPTPAPATRPSGFPDASGFWHDSFKMCKSAFKLDSDSDDEDTHFSAGASGTP
QRLAPESQSPHSQSTFSTLVTVLKGRITAHCETKDECGKRLEATHGELVLDVEQGTIFSV
CQYRGQPGLGYFCLEAEKATLYHRAAVDDYLLPSRLELPTFAPPAQLARTIYPSEEGMTE
QGGMGRKGQGRGPHMLSTAVRIQLDPHRNVKEFLVTLRLHRATLRHHMALPEQSWHSQLL
EFLDVLDDPVLGYLPPTVITILHVHLFSCAVDYRPLYLPVRVLVTAETFTLSSNIVMDTS
TFLLRFILDDSALYLSDKCDMETLDLRRDYVCVLDVDLLELVIKTWKGSTEDKLSRPLFE
LRCSNSAMHVHSCADSCALLVSLLQYVTSEGDLHPPPRPPSPTEIAGQKVQLSESPASLP
SCPPVETALINQRDLTDALLDTERSLRELAQASGSPFFQASPVSVYLFPGERSGAQPPSP
LVGAPTGSLGSHSEAKEEEKEEEGDGDTLDSDEFCILDAPGLGILPQDGEPVVTQLHPDP
IIVQDGHFSQPLGSTDLLRAPAHFPVPSSRVVLREVSLVWHLYGGRDFGPHPGHRARAGL
TGPRSSPSRCSGPNRPQNSWRAQGGSGRQHHVLMEIQLSKVSFQHEVYPAEPGPVAPGKE
PEEQPLSRQVFIVQELEVRDRLASSQINKFLYLHTSERMPRRTHSNMLKIKALHVAPVTN
LGGPECCLRVSLLPLRLNVDQDALLFLRDFFTSLAASINPVVPAETSTEAHPETPVQPSG
PQEGQPEGVETTSSQEAAGGRHGAAPAEQQPIYFREFRFTSEVPIWLDYHGKHVTMDQVG
TFAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGP
MHSVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQA
TAETVYDILSPAAPISRSLQDKRSVRRLRKGQQPADLREGVAKAYDTVREGILDTAQTIC
EVASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQILPDAHKDHALK
WRLDEARD
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctatggccgtggtcgaactgtgtgaaagagcgggtctgccgctacttg
ctgcaccactacttgggtcacttcttccaggagcacctcagcctggaccagctcagcctc
gatctgtacaagggcagcgttgtcctgcgggatatacacctggagatctggtctgtgaat
gaggtgctggagtccatggagtcgccactggagctggtggaaggcttcgtgggctctatc
gaggtggccgtgccctgggccgcgctgctcaccgaccactgcaccgtgcacgtgtcaggc
ctccagctcaccttacagccccgccagggcccggggccgggggctgccgactcacagagc
tgggcctcgtgcatgaccacgagcatgcagctggcccaggaatgcctgcgggatgggctg
cccgagccctctgagccaccacagcccctggaaggactggagatgtttgcccagaccatt
gagactgtactgcgaaggatcaaggtgaccttcctggatactgtcgtgagggtagagcac
ccgcccggtgctggggagcgtggcgtggcagtggaagcccacgtgcaaagactagagtac
tgcgacgaggccgtgcgagacccaagccaggcaccgcccgtggatgtgcaccagccccct
gccttcctccacaaactgctgcagctggcgggggtccgcctgcacttcgaggagctccgc
ccacaggaaggacccccagagcctcccttgcagattggcagctgctcagggtgcctggag
ctgacagtgaaattgaagcaaaatgaggccttcccaggccccaagctggaggtgtgtggg
cagctgggctccctgcacctgctcctgaccccacggcagctccagcagcttcaggaactg
cttggcgcactgagccttgcagaccccgagggcctggtcgacaagctgaacaagagccgc
ccactaggtgctgacgatctgtggctgattgaacaggatctgaaccagcagctgcaggcg
gggaccgtagctgagcccctcggctcagaccccctttcgaacccccttgtcaacttggag
agcactgacctcttcttctccatggcgggcctcacaagcagtgtggcctcagccctgtct
gagctctccctctccgatgtagacctgggcacctctgtgcacagcaacatggcctcccgc
cagctctctgctcagggccccccaaccggcaagacagcccctgcacccccctcgaacacc
ctgcgccctgactcgctgctgaagatgaccttggggggtgtgaccctgaccttgcttcag
acatctgccccgtcttccggaccacctgacctcaccacccacttttttgcggagttcgat
gccaccaaggatgggtccttcggctcccatgacttctaccatctccgaccgcgcttccag
agggcctgtccctgtagccatgtccggctaacgggtgccgctgtgcagctttcctgggag
ctgaggacaagcaggggccggcggattaccagcacggaagtgcacttcgggcagctcgag
gtgctggagtgtctgtggcccaggggtactccggagcctgagtacacagaggtcctgagc
ttccccagcggcctgcggtcccaggcctcggttcagccttgcgctcacctgcgccacacg
cagaccctgcgccggctgcccaagagccggccccggcgcccaactgcctgccattgtcac
tcagaactggccctggacctggccgacttccaggcagatgtggagctgggggccctggac
cggctcgctgccctgctgtaccaggccaccacaccgcctcccgagcagccggctggcctg
ctgacagagcccccgccagcagctgagcagcatgcagtggtgcggctctcggcaccccgg
gccacactgcagctgcgcttccccattgctgacctgcggcctgagcgggacccctgggtg
ggcggggccgtgcgggccgagcagctgcgcctggagctgactgagccccagttccggtca
gagctgagcagtgggcctggccccccagcccccacccgcctggaactctcctgctccgac
ctccatgtcacctacgaagacggagagaagccacctgtcccctgcctgcgggtctccaaa
gccctggatcccaagagccctgggcacaagtacttcctgccccaggtagtggtgaccctg
aacccccagctcggcgcacagtgggaagtgaccccggagaaaggagaggagctggagttg
tcggccgagaatctgtgcgagcttcgggagcctgagccctcacccttctcctccaaaagg
accatgtacgagacggaagagatggtgattcctggagaccctgaggaaatgaggaccttt
cagagccgggccctggcgctgtcccgctgcagcctggaagtggtcctgcccggcgcccac
gtcttcctgcccagcaaggaggtctacgagagcctctacaacaggatcaacaacgacctg
ctcatgtgggagcccgcggacctgcttcccacccccgcccctgccactcgcccctctggc
ttcccagatgcctcgggcttctggcacgacagcttcaagatgtgcaagtctgccttcaag
ctggactcggactcggacgacgaggacacccacttctcagcgggggcatcaggcaccccc
cagcgccttgcccctgagtcccagagccctcactcccagagtaccttctctacactggtg
acggtgctaaagggtcggatcacggcccactgtgagaccaaggacgagtgcgggaagcgg
ctggaggccacgcacggggagctggtgctggacgtggaacaaggcaccatcttcagcgtc
tgccagtaccgaggccagccgggactcggctacttctgcctggaagctgaaaaggcgaca
ctgtaccaccgagcggctgtggatgactacctgctgcccagtcgcctggagctgcccacc
tttgctcctccggcccagctggcccgaaccatctacccgtcggaggaagggatgactgag
caaggaggcatgggccgcaaaggccagggccggggcccccacatgctgtccaccgcggtg
cgcatccaactggaccctcacaggaacgtcaaggagttcctggtgacactgcggctgcac
agagccaccctgcgccaccacatggccctgccagaacagagctggcactcccagctgttg
gagttcttagatgtcctggatgacccagtgctgggctacctgcctccaacggtcattacc
atcctacatgtacacctgttctcctgtgccgtggactacaggcccctctacctccctgta
cgtgtccttgtcactgctgagaccttcaccctctccagcaacatcgtcatggacacctct
accttcctgctcaggttcatcctcgacgactccgccttgtacctgtccgacaagtgtgac
atggagaccctggatctgcggcgagattatgtctgtgtcttggacgttgaccttctggag
ctcgtgatcaaaacctggaaggggagcactgaggacaaactgagccggccactcttcgag
ctgcgctgctccaacagtgcaatgcatgtgcatagctgtgctgactcctgcgccctgctg
gtcagcctgctccagtacgtgacgagtgagggcgacctgcacccccctccccggcccccc
agccccacggagatcgccggccagaaggtacagctctcggagagccctgcctccctgccc
tcatgccccccagtggagacagccctcatcaaccagcgggacctgaccgacgccctcctg
gacacggagcgcagcctgcgggagctggcccaggcttcagggagccccttctttcaggcc
tctccagtgtcggtctacctattcccaggtgaacggagtggggcccagcccccctcgccc
ctggttggggcccccactggcagcttggggtcccactcagaggccaaagaagaggagaag
gaagaggagggggatggagacactctggacagcgatgagttttgcatccttgacgctcct
ggcctgggcatattgccccaagatggggagcctgtggtgacacagctgcatccagacccc
atcatagtgcaggacgggcacttctcacagccgctgggcagcacggacctgctgcgggca
cctgcccacttcccagtgcccagcagtcgtgtggtgctgcgtgaggtctcccttgtctgg
cacctctatgggggccgagactttggcccccatcccggacacagggcaagagcaggcctc
acaggccccaggagctccccttctcgctgctccggccccaaccggccccagaactcctgg
cgtgcgcaggggggcagtggcaggcagcaccacgtcctcatggagatccagctcagcaag
gtgagcttccagcatgaggtgtacccggcagagccaggccccgtagcccccggcaaggag
cccgaggagcagccgctgtcccgccaggtgttcatcgtgcaggagctcgaggtccgagac
cggctggcctcctcccagatcaacaaattcctgtatttacacacgagtgagcggatgcca
cggcgcacccactccaacatgctcaagatcaaagcgctgcacgtggcccccgtgaccaac
ctgggtgggcccgagtgctgtctccgcgtctcactgctacccctgcggctcaacgtggat
caggatgctctgctcttcctcagggatttcttcaccagcctggcggccagcatcaaccct
gtggtcccggcggagacctccactgaagctcaccctgagaccccagtccagcccagcggc
ccccaggaagggcaacccgagggtgtggagaccaccagctcccaggaggctgcaggcggt
agacacggcgccgcccctgctgagcagcagcccatctacttcagggagttccgcttcacg
tccgaggtgcccatttggctggattaccacggcaagcacgtcaccatggaccaggtgggc
actttcgcaggcctcctcataggcctggcccagctcaactgctccgagctgaagctaaag
cggctgtgttgccggcatgggctcctgggtgtggacaaggtgctgggctatgctctcaac
gagtggctgcaggacatccgaaagaaccagttgcctggcttgctggggggcgtgggcccc
atgcactctgttgtccagctcttccaagggttccgggacctgctgtggctgcccatcgag
cagtacaggaaggatgggcgcctcatgcgggggctgcagcggggggctgcctccttcggc
tcatccacagcttcagccgccttagaactcagcaaccggctggtgcaggctatccaggcc
acagccgagacggtgtacgacatcctgtccccggcagcgcccatctcgcgctccctgcag
gacaagcgctctgtgcgaaggctgcggaagggccagcagccggctgaccttcgggagggt
gtggccaaggcctacgacacagttcgagagggcatcctggacacagctcagaccatctgc
gaggtggcgtctcggggccatgaacagaaggggctgacaggcgctgtggggggcgtgatc
cgccagctgcccccaacggtggtgaagcccctcatcctagccacagaggccacatccagc
ctcctgggggggatgcgcaaccagatcctccctgatgcgcacaaggaccacgctctcaag
tggcgtttggacgaggcccgggactga
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integrated database retrieval system
