Phocoena sinus (vaquita): 116758243
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Entry
116758243 CDS
T07759
Symbol
RAPSN
Name
(RefSeq) 43 kDa receptor-associated protein of the synapse isoform X1
KO
K24924
receptor-associated protein of the synapse
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116758243 (RAPSN)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
116758243 (RAPSN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_1
TPR_2
TPR_8
TPR_MalT
zf-RING_5
zf-RING_2
TPR_19
TPR_11
zf-RING_11
SNAP
TPR_10
DUF3856
RPN7
zf-RING_UBOX
ARM_TT21_N
RH_dom
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-C3HC4
Cohesin_load
BBS2_hp
zf_RING_Vps8
zf-rbx1
PHDvar_NSD
Cys_rich_CPXG
Rtf2
Motif
Other DBs
NCBI-GeneID:
116758243
NCBI-ProteinID:
XP_032496958
Ensembl:
ENSPSNG00000010989
UniProt:
A0A8C9CB20
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Position
8:complement(97419723..97429717)
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AA seq
412 aa
AA seq
DB search
MGQDQTKQQIAKGLQLYQSNQTEKALQVWTKVLEKSSDLVGRFRVLGCLVTAHSEMGRYK
EMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAATQ
LGGQVSLSMGNAFLGLSLFQKALESFEKALRYAHNNDDTMLECRVCCSLGSFYAQVKDYE
KALFFPCKAAELVNDYGKGWSLKYRAMSQYHMAVAYRLLGHLGSAMECCEESMKIALQHG
DRPLQALCLLCFADIHRSRGDLETAFPRYDSAMSIMTEIGNRLGQVQVLLGVAKCWVARK
ALDKALEAIERAQDLAEEVGNKLSQLKLHCLSESIYRSRGLQRELRAHVVRFHECVEETE
LYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCHRSSMKPGFV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggggcaggaccagacgaagcagcagatcgcgaaggggctccagctgtaccagtctaac
cagacagagaaggcgctgcaggtgtggacgaaggtgctggagaagagctcggacctcgtg
gggcgtttccgtgtgctgggctgcctggtcacggcccactcggagatgggccgctataag
gagatgctgaagtttgctgtggtacagatcgacacggctcgggagctggaggatgccgac
ttcctcctggagagctacctgaacctggcgcgcagcaacgagaagctgtgcgagtttcac
aagaccatctcctactgcaagacctgcctcggcctgcccggcacccgggcagccacccag
ctcggaggccaggtcagcctgagcatgggcaacgccttcctgggcctcagcctcttccag
aaggccctggagagcttcgagaaggccctgcgctatgcccacaacaacgatgacaccatg
ctcgagtgccgtgtctgttgcagcctgggcagcttctacgcccaggtcaaggactacgag
aaagccctgttcttcccctgcaaggctgcagagctcgtcaacgactatggcaaaggctgg
agcctcaagtaccgggccatgagccagtaccacatggctgtggcgtatcgcctgctgggc
cacctgggcagtgccatggagtgctgtgaggagtctatgaagattgcactgcagcatggg
gaccggccactgcaggcactctgcctgctctgctttgctgacattcaccggagccgtggg
gacctggagacagccttccctaggtacgactctgccatgagcataatgaccgagattgga
aaccgcctggggcaggtacaggtgctgctgggtgtggccaagtgctgggtggccaggaag
gcgctggacaaggctctggaggccatcgagagagcccaggacctggccgaggaggtgggg
aacaagctgagccagctcaagcttcactgcctgagcgagagcatctaccgcagcagaggt
ctgcagcgggagctgcgcgcccacgtcgtgcgcttccacgagtgcgtggaggagacagag
ctctactgcggcctgtgcggcgagtccataggcgagaagaatagccggctgcaggctctg
ccctgctcccacatcttccacctcaggtgcctgcagaacaacgggacgcggagctgcccc
aactgccaccgctcatccatgaagcctggctttgtgtga
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