Phocoena sinus (vaquita): 116758261
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Entry
116758261 CDS
T07759
Symbol
PRDM10
Name
(RefSeq) PR domain zinc finger protein 10 isoform X1
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116758261 (PRDM10)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116758261 (PRDM10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_2
zf-C2H2_6
SET
Zn_ribbon_PRDM4
Zf-C2H2_ZNF451
zf-Di19
DUF629
zf-C2H2_STOP2_C
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
116758261
NCBI-ProteinID:
XP_032496989
Ensembl:
ENSPSNG00000004026
UniProt:
A0A8C9BDJ9
LinkDB
All DBs
Position
8:4364031..4452211
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AA seq
1146 aa
AA seq
DB search
MDSKDESSHVWPPAAEHEENAAQVHFVPDAGTVAQIVYTDDQVRPPQQVVYTADGASYAS
VDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHSQVLPSLEGVGGSDPL
ATLQSPMTRLEAKDEEDSEDSEEEEEDGGDTDLDDWEPDPPRPFDPHDLWCEECNNAHSS
VCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRES
ELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYG
HHVYYTTIKNVEPKQELKVWYAASYAEFVNRKIHDISEEERKVLREQEKNWPCYECNRRF
ISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKC
DDGTQDLLHFPTKEQFDEAEPATLNGLDQPEQPALAVPQLPPEAQSSLEHETETHELHLQ
PQHEESVLPTQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQH
LRFHGREGSCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVA
IHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSD
RKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFK
CRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRK
AHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTK
MVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQ
TLTTDYRTPQGDYQRIQYIPVSQSTSGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVAQL
HDPQTYTQHAIQVQHIQVTEPPAPAAPASQVAGQPLSPSPQQSQQGLSPSQVAGSSSQGQ
ALQQQPQSTTVQHTYLPNAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVT
PGHYVLSESQSELEEKQASALTGGVQVQPTAHGDLDPQTTSQQPAQYIITTTTNGNGSSE
VHITKP
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaagatgaaagctcacacgtgtggcctccagctgcagagcacgaggagaat
gctgcacaggtgcattttgttccagacgctggaactgtggcccagattgtctacaccgat
gaccaggtccgtccaccacagcaggtggtgtacacagcagatggtgcctcttacgcgtca
gtggatggtccggagcacacgctggtctacatccatcccgtggaagctgcgcagacgctg
tttacagacccaggccaggtagcttatgtccaacaggatgctacagctcagcaggcctcg
ttgccggtgcacagccaggtgctaccttcacttgagggtgtgggtggctcggaccctttg
gcgaccctgcagagccccatgaccagactggaggccaaggacgaggaggactcagaggac
tcggaggaggaggaggaggacggcggagacacagacctggacgactgggagcctgacccc
cctcggcccttcgacccgcacgacctgtggtgtgaggagtgtaataacgcacactcgtcc
gtgtgcccgaagcatggccccctgcatccgatccccaaccggccggtgctcactcgggcg
cgggccagcctccccctggtgctgtacatcgacaggttcctgggcggtgtgttctccaaa
aggcgtatccccaagcgcacccagttcggccccgtggaggggccactggtcagggagtcg
gagctgaaggactgttacatccacctcaaggtttctcttgataaaggtgacagaaaagac
agggatttgcatgaagacctgtggtttgagttgtctgacgagaccctctgtaactggatg
atgttcgtgcgcccggcccagaatcacctggagcagaacctggtggcttatcagtatggc
caccacgtgtactacacaacaatcaagaacgtggagcccaagcaggagcttaaggtgtgg
tatgctgcttcctatgccgagtttgtgaaccggaagattcatgacatttccgaggaagaa
aggaaagttcttcgagagcaagagaagaattggccctgctacgaatgtaaccgccgattt
ataagctcagagcagctgcagcagcatctcaattcgcatgatgagaaactggatgtgttt
agcagaacaagaggcagaggaagggggcgaggcaagaggcggtttggcccaggtcggcgg
ccgggacgccctcccaaatttatccgcttggaaataaccagtgaaaatggggaaaagtgt
gatgatgggacacaggacttgctgcattttcccaccaaggagcagttcgatgaggctgaa
cctgcaactctgaatgggctggatcaaccagagcagcccgcgctcgcagtccctcagctg
ccaccggaagcccagtcttctctggagcacgagacggaaacgcacgagctgcacctgcag
ccccagcacgaggagagcgtgctgcccacccagagcaccctgacggccgacgacatgcgc
agggccaagcgcatccggaatgcagctcttcagcatctgtttattcggaagtccttccgg
ccttttaaatgtttgcagtgtgggaaggccttccgtgaaaaggacaaactggaccaacac
ttgcgcttccatgggcgggaggggagctgcccattgacctgtgacctctgtaacaagggc
ttcatcagcagtgcgtccttggagagccacatgaagctccactcggaccagaagacttac
tcttgcattttttgcccagaatcctttgaccgccttgatttgttgaaagatcacgtggcc
attcatatcagtgatggctacttcacctgcccaacttgtaagaaacggttcccagatttt
atccaggtgaaaaaacacgtgcgaagcttccactcggaaaagatctaccagtgtacggag
tgcgacaaggccttctgccgccccgacaagctgcggctgcatatgctccggcactcagac
cgtaaggacttcctgtgttctacgtgtgggaagcagtttaagcgaaaagacaaactacgg
gaacacatgcagaggatgcacaaccctgagagggaggccaagaaagctgaccgcatcagc
cgctccaagacgttcaagccgcgcatcacgtccaccgactacgacagcttcacgttcaag
tgccgcctgtgcatgatgggcttccggagacgaggcatgctggtaaatcacttatcaaag
aggcacccagacatgaagatagaagaggtgccagagttaactctacccatcataaagccc
aaccgtgactacttttgtcagtattgtgataaggtttataaaagtgccagcaagcgaaaa
gcccacattctgaagaaccatcctggggctgagctcccaccaagcattcggaaacttcgt
cccgctggccctggagaaccagaccccatgctgagcacccacacccagctcacgggcact
atagctaccccgcccgtgtgctgccctcactgctccaaacagtacagcagcaagaccaag
atggtacagcacattcgaaagaagcatccagagtacgcccagctacccaacaccatacac
acacctctgacaacagccgtgatcagtgcggctccagctgttttaactacagacagtgct
accggagagactgtggtgacaacagacttgctaacccaggctatgacagaactgtcccag
accttgacgacggattaccgaacgccgcaaggggactaccagagaatccagtacattcct
gtgtcgcagtctacatctggtctacagcagcctcagcacatacagcttcaagtggtgcag
gtggccccggccacttcccctcaccagtcccagcagtccacggtggacgtcgcccagctc
cacgaccctcagacctacacacagcatgccatccaggtgcaacacatccaggtcacggag
ccccccgccccggccgcgcccgcctcccaggtggcagggcagccgctgagcccctccccg
cagcagtctcagcaggggctcagcccctcccaggtcgcaggcagctcctcgcagggccag
gccctccagcagcagccccagagcaccacggtccagcacacgtacctccccaatgcctgg
aattccttccgcggctactcatcggagattcagatgatgacgctccccccgggtcagttt
gtgattacagacagtggcgtggcaactccggtcaccactggccaagtgaaggcggtgact
ccaggtcattatgtgctatcagaaagtcaatcagaattggaggaaaagcaagcttctgct
ctcactggtggagtccaggttcagccaactgcacatggtgacttggacccccagaccacc
agccaacagcccgcccagtacatcattacaaccaccaccaacgggaatgggagcagcgaa
gtgcacatcactaaaccttaa
DBGET
integrated database retrieval system
