Phocoena sinus (vaquita): 116758436
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Entry
116758436 CDS
T07759
Symbol
NLRP6
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 6
KO
K20863
NACHT, LRR and PYD domains-containing protein 6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116758436 (NLRP6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
psiu04054
]
116758436 (NLRP6)
Pattern recognition receptors [BR:
psiu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116758436 (NLRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
NOD2_WH
AAA_16
nSTAND3
LRR_1
Kinase-PPPase
AAA_25
P-mevalo_kinase
AAA
Motif
Other DBs
NCBI-GeneID:
116758436
NCBI-ProteinID:
XP_032497134
LinkDB
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Position
8:complement(110315433..110323093)
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AA seq
943 aa
AA seq
DB search
MGAASKPLPLVGARGWGPERRGGAGVTGARHACQPRAPALSTEARAAAAREVLLAALEDL
SQERLKRFRHKLRDAPLHGLRKPWGRLEGADAVDLAEHLIHFDGPERRLDAARKTLKRAG
VRDVAALLKEQRLRSLGLSSXALLSVSEYKKKYREHVLRQHAKVKERDARSVKMSERFSK
LPIAPDSAALEHVAVGPAEEPEPERARRSDTHTFNRLLGRDGEGQRPPTVVLQGPAGIGK
TMAARKILYDWAAGKXVLERPRTCSLADLTPDQYPDRNAPVRQMLAQSTRLLSILDGVDE
LPAPGPAEAAPCTDPLEAASGARMLGGLPSKALLPTARVLVTARAAAPGSLQSRLCSPQR
AEVRGPYDKDKKYFYRFFQDEWRAERAYRCAKENETLFSLCFAVCWTVLRQLLXGPDLSR
TSKTTTSVYLLFIGSVLSSAPAADRPRLQEELHKLCRLACEGVLGGRAQVSEKDLERLEL
CGSKVQAQFLSKKXVTGVLETEVTYRFIDQTFQEFLAVLSYLLEDEGXPQTPAGGVGALL
RGHPEPRGHLALTTRFLFGLLNTERMRDIEHHFGCAVSERGKQEVLRWVQDQGQGCPRAA
PEGTEGTQALRGAGESEEEEGEELRDLLELLYCRYETQEGALVHQALRGLRELALEXVHF
SRMDLAVLSYCVPCCPAGQALQLVSCRLATAQEKKKKGLMKRLQGSLGGSSGKARAVVSV
QLIPTQHLTQVLSICWENERQDADGAGAGDAHCRCEDRPTWCVQTEPQPPGSGQLAQLGT
HVPPDHRLSRCKLPDLVCRDLSEALTELGLFHSWLSEAGLHVLSEGLAXPQCRLQTLRXG
PAWKGPRGRQGLQYVFGLLQQSPALTTLDLSGCQLSGTMTTHLCAILQLPGCRLQSLSLT
SVELSERSLQELRAVGTAKVGLAVTHPALDSDPQPHKGLSSDP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgtctaagcccctgccgctcgtgggcgcccggggctggggtccggagcgg
cggggaggggccggggtcaccggggcacggcatgcgtgccaaccccgtgcgcccgccctc
agcacggaggcccgcgctgccgccgcccgggaggtgctcctggctgcgctcgaagaccta
agccaggagcggttgaagcgcttccgccacaagctgcgggacgcgccgctgcacggcctc
cgcaaaccgtgggggcggctggagggcgcggacgccgtggacctcgcggagcacctgatc
catttcgacgggccggagcgcaggctggacgcggcgcgaaagaccctgaagagggcgggc
gtgcgcgatgtggcggcgctgctcaaggagcagcggctgcggagcctcggcctcagctcc
taggcgctgctctccgtgtccgagtacaagaagaaataccgagagcacgtgctgcggcag
cacgccaaggtgaaggagagggacgctcgctccgtgaagatgagcgagcgcttcagcaaa
ctgcctatcgcgcccgatagcgctgccctggagcacgtggctgtggggcccgcggaagag
ccggagccggagcgcgctcggcgatctgacacccacaccttcaaccgcctgctcggccgc
gacggggagggccagagaccgccgaccgtggtgctgcagggcccggcgggcatcggcaag
accatggcggccaggaaaatcctgtacgactgggcggcgggcaagnnggtgctggagcga
ccgcgcacgtgcagcctggccgacctgaccccggaccagtaccccgaccgcaacgcgccg
gtgcggcagatgctagcgcagtccacgcggctgctgtccattctggacggcgtggacgaa
ttgccggcgccagggcccgccgaggccgcgccctgcacagacccccttgaggccgcgagc
ggcgcgcggatgctgggcggcctgccgagcaaggcgctgctgcccacggcccgcgtgctg
gtgaccgcgcgcgccgccgcccccgggagtctgcagagccgcctgtgctccccgcagcgc
gccgaggtgcgcggcccctacgacaaggacaagaagtacttctacaggttcttccaggac
gagtggagggcggagcgtgcctaccgctgcgcgaaggagaatgagacgctgttctcgctg
tgcttcgccgtgtgctggaccgttctgcgccagctgctcncaggtcctgacctgtcgcgc
acctccaagaccaccacgtccgtgtacctgcttttcatcggcagcgtcctgagctcggcg
cccgcggccgaccgacctcgcctgcaggaagagctgcacaagctgtgtcgcctggcctgc
gaaggcgtcctcgggggcagggcgcaggtctctgagaaggacctggaacgactggagctt
tgcggctccaaagtccaggcgcagtttctcagcaagaagnatgtgacaggcgtgctggaa
accgaggtcacctaccggttcatcgaccagaccttccaggaattcttagccgtgctgtcc
tacctgctggaggacgaagggnctccccagacacctgctggcggcgtaggagcacttctg
cgggggcacccggagccgcgtggccacctcgcgctcactacgcgcttccttttcgggcta
ctgaacacagagaggatgcgcgacatcgagcaccacttcggctgcgcggtttcagagcgc
gggaagcaggaagtcctgaggtgggtgcaggatcagggccagggctgccctagggcggcg
ccagaggggaccgaggggacccaagcgctccggggcgctggggagtcagaggaggaggag
ggcgaagagctccgcgacctgctggagctgctgtactgccggtacgagacgcaggagggc
gcccttgtgcaccaggccctgcgcggcctccgtgagctggcactggagtgagtgcacttc
agcagaatggacctggccgtcctgagctactgcgtgccgtgctgcccggcggggcaggcc
ctgcagctggttagctgcagactggccactgcccaggagaagaaaaagaagggcctgatg
aagcggctacagggcagcctgggaggcagctcgggcaaagctcgtgccgttgtttctgta
cagttaattccaacccagcacctgactcaggtgctcagcatctgttgggagaacgaacgg
caggacgctgacggggctggggctggggatgcccactgcaggtgcgaggacaggcccacc
tggtgtgtgcagactgaacctcagcccccagggagtgggcagcttgcacagctggggacc
catgtacctcctgaccataggctgtcccgctgcaaactgcccgacttggtctgcagagac
ctctctgaggccctgacggagctgggcctcttccacagctggctcagcgaggccggcctg
catgtgctgagtgagggcctggcctgaccccagtgcaggctgcagacactcaggtgaggg
ccggcctggaagggaccaagggggagacaggggctccagtacgtgtttggcctgctccag
cagagcccagcgctgactacccttgacctcagtggctgccagctgtcggggactatgacg
acccacttgtgtgccatcctgcagctcccagggtgccgcctgcaaagcctcagtctaacc
tccgtggagctgagcgagcggtcactgcaggagctgcgggccgtggggacagcaaaggtg
ggactggccgtcacccacccagcgttggacagcgacccccagcctcacaaagggctcagc
agtgacccctga
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