Phocoena sinus (vaquita): 116758525
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Entry
116758525 CDS
T07759
Symbol
AP5B1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116758525 (AP5B1)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
116758525 (AP5B1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
116758525
NCBI-ProteinID:
XP_032497293
Ensembl:
ENSPSNG00000011066
UniProt:
A0A8C9C267
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Position
8:complement(103647631..103658925)
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AA seq
877 aa
AA seq
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MGPTSREAWAQRLGTFRASPSTFMAGPEGEDLGRHLLSDLRSEKLSEPTKVSLLALSLEY
PAQLWPDAPAAEVAATSLLDTLVLLPPRPSALRRPLLLAATTALAAGGALGPTSRASRRL
LPLLLGLASGRDLGRSFGPASEQRPLQATAWECLRELESCKPGLLGGCLGLLRGLLGQEA
AVQPLSLLLALALRNALVIQARARAGLQGLLVAGDCPTEGGPWNWMLAEEGDAHLQPQAP
SWPPAEEGECCLATLELSPEEARELRAAVAQLLDISYLLTPVAQAQLLWLLGWALRGLRG
QPPVLFKPQLVRLLGTAQLTLLHAILALKAAFGEALFTAQDEALLLRRLTLAAQHPALPL
PAHLFYLHCLLNFPENWPLGPAGEEAAPLLLGSQLCRGLLPSLLHDPMALLARLHLLCLL
CVEDEEKEEKGQDQSPRQYLEELLAGLRQRAALDGGPRALATLCFQASYLVARCLAGQPV
VLTPLTHGLAQLYRARPALAPHFVDLLDRVGPELGEPLKVVLRQEVVSRPGRDEALRWHL
QMLARVADGDAQSATLGFLQAAAARCTDWGLQQALLQVCRALLRAGVGGGLADLLQALAR
QLEDPDGRDHARLYYILLAHLEEPKLGVALGPSLAAPALASSLVAENQGFAAALLVQEAP
APIRLSMGPHRAKGPVPVLQLQVEVLEQVYSLELRFRVERQLYAPLGAVHVPCLCPGRPT
RPLLLPLQPRRPAPARLAVRALYTTPSGLTCHAHLPPLLVNFADLFLPFPQPPEGAKLGF
FEELWDSCLPKGTESRLWCPLGPHGLEALVSRHLEPFVVVAQPPTSYLIAIRLPPDSRLL
LRLEAAQADGVPVALRTDDWAVLPLVGDYLRGLSAAG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggggcccacgagccgggaagcctgggcccagcgcctgggcaccttccgggccagcccg
tccaccttcatggcaggtcctgagggtgaggatctgggtcgtcacctgctgagcgacctg
aggagtgagaagctgagcgagccaactaaggtttccttgctggctctgagcttggagtac
ccagcgcagctgtggccggacgctcctgcggccgaagtagccgccacctccttgttggat
accctggtccttctacccccgcggccctcggctctgcggcggccccttctgctggcggcc
accacagccttggcggcaggaggtgcgttgggccccacctcgagagcctcccgccggctc
ttgcccctgctgctgggcttggcctcgggccgcgatttggggagaagcttcggccctgcc
tcggaacagcgccccctgcaggccacagcgtgggagtgcctgcgggagctggagagctgc
aagcctgggctgctggggggctgtctggggctacttcggggcctgctggggcaggaggcc
gctgtacagccactcagcctgctgctggcacttgccctgcgaaacgccttggtgatacag
gccagggccagggctggcctgcagggcctgcttgtggctggggactgtcccaccgagggt
ggtccctggaactggatgctagctgaggagggtgatgcccaccttcagccccaggcaccc
agttggccaccagctgaggagggggagtgttgccttgccacgctggagctcagtcctgag
gaggcccgggagctgcgggctgccgtggcccagcttctggacatctcctacctgctcact
cctgtggcccaggcccagcttctgtggctgctgggctgggccctgcggggtcttcgggga
cagccaccagtgctcttcaagccacagctggtacggctgctgggcacagcacagctgacg
ctgctgcacgccattctggctctgaaggcggcctttggtgaggcactgtttacagcccag
gatgaggccttgctgcttcgccggctcaccttggctgcccagcacccggccctgcccctg
cctgcccatctcttctacctgcactgcctcttgaacttccctgagaactggccactgggc
cccgcaggcgaggaggctgccccgctattgctggggtcccagctatgccgtggcctcctg
cccagtctcctgcatgacccgatggccctgctggcccgcctgcatctgctgtgcctcctc
tgtgtggaagacgaagaaaaggaggaaaagggccaggatcagagcccccggcagtacctg
gaggagctactggctggcctgcggcagagggcagccctggatggtggcccccgggcctta
gccactctctgcttccaggcctcctaccttgttgctcgctgcctggccgggcaacctgtg
gtgctgacacccttgacccacggactggcccagctgtaccgagcccggcctgcactggct
ccccatttcgtggatctcttggatcgggtgggccctgagctgggggaacccttaaaggtg
gtcttgcggcaggaggtggtgtccaggccaggcagggatgaggcccttcgttggcacctg
cagatgctggcaagggtggcagatggggatgcccagagtgccacccttggcttcctgcag
gctgcagctgctcgctgcacggactggggtctccagcaggccctcctgcaggtctgccgg
gccctgctgcgggcaggcgttggaggaggcctggcggacttgctgcaggccctggccagg
cagctggaggaccctgatgggcgggaccacgcgcgcctctactacatcctcctggcccac
ctggaagagcccaagctgggggtggccttgggcccctcccttgccgcacctgcactggcc
tcttcgctggtggccgagaaccagggctttgctgcagcgctgctggtgcaggaggccccg
gccccgattcggctaagcatgggtccccacagagccaagggcccggtcccagtgctgcag
ctccaggtggaggtgctggagcaggtgtattctctggaactgcgcttccgtgtggaaaga
cagctctatgcacccttgggggctgtgcacgtgccgtgcctgtgccctggccgccccacc
cgccctctgctgctgcctctgcagccccgacgcccggctcccgcgaggctggctgtgcgc
gccctgtacaccacacccagcggcctcacctgccatgctcacctgccacccctgcttgtg
aacttcgctgacctctttctgcctttcccccagccccccgagggggccaagctgggcttc
ttcgaggagctctgggactcctgcctgccaaagggcaccgagagtcgcttgtggtgccct
ctagggccacatgggctggaggccttggtgtcccgccacctggagccctttgtggtggtg
gcccaacccccgaccagctaccttatagccatccgtctgcccccagactcgcggttgctg
ctgcggctggaagcagcccaggcagacggagtgcctgtggccctgcggactgatgactgg
gccgtgctgcctctggtgggggactacctccgggggctgtcagcggctggctga
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