Phocoena sinus (vaquita): 116758548
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Entry
116758548 CDS
T07759
Symbol
PSMA1
Name
(RefSeq) proteasome subunit alpha type-1 isoform X1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03050
Proteasome
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116758548 (PSMA1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116758548 (PSMA1)
05012 Parkinson disease
116758548 (PSMA1)
05014 Amyotrophic lateral sclerosis
116758548 (PSMA1)
05016 Huntington disease
116758548 (PSMA1)
05017 Spinocerebellar ataxia
116758548 (PSMA1)
05020 Prion disease
116758548 (PSMA1)
05022 Pathways of neurodegeneration - multiple diseases
116758548 (PSMA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116758548 (PSMA1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psiu03051
]
116758548 (PSMA1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116758548 (PSMA1)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
116758548 (PSMA1)
Peptidases and inhibitors [BR:
psiu01002
]
Threonine peptidases
Family T1: proteasome family
116758548 (PSMA1)
Proteasome [BR:
psiu03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
116758548 (PSMA1)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116758548 (PSMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
116758548
NCBI-ProteinID:
XP_032497343
Ensembl:
ENSPSNG00000005548
UniProt:
A0A8C9BEF1
LinkDB
All DBs
Position
8:complement(68622968..68635444)
Genome browser
AA seq
263 aa
AA seq
DB search
MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ
KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM
ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERP
QRKTQPTQPADEPAEKADEPMEH
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcaaccagtatgacaatgatgtcactgtttggagccctcagggcaggattcat
caaattgaatatgcaatggaagctgtcaaacaaggttcagccacagttggtcttaaatca
aaaacccatgcagtgttggttgcgttgaagagagcacagtcagaacttgcagctcatcag
aaaaaaattctccatgttgataaccatattggtatctcaattgcgggacttactgctgat
gctagattgttatgtaattttatgcgccaggagtgtttggattccagatttgtatttgac
agacctcttcctgtgtctcgtcttgtatctctaattggaagcaaaactcagataccaaca
caaagatatggccggagaccatatggtgttgggctgcttattgctggttatgatgatatg
ggccctcacattttccaaacgtgtccatctgctaactattttgactgcagggctatgtcc
attggagcccgttctcagtcagctcgtacttacttggagagacatatgtcagagtttatg
gagtgcaatttgaatgaactggttaagcatggtctgcgtgccttacgggagacacttcct
gcagaacaggacctaactacaaagaatgtttccattggaattgttggtaaagacttggag
tttacgatttatgatgatgatgatgtgtctccattcctggaaggtcttgaagaaagacca
cagagaaagacacagcctactcagcctgctgatgaacctgcagaaaaggctgatgaacca
atggaacattaa
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integrated database retrieval system
