Phocoena sinus (vaquita): 116758553
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Entry
116758553 CDS
T07759
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04620
Toll-like receptor signaling pathway
psiu04621
NOD-like receptor signaling pathway
psiu04622
RIG-I-like receptor signaling pathway
psiu04623
Cytosolic DNA-sensing pathway
psiu05160
Hepatitis C
psiu05161
Hepatitis B
psiu05162
Measles
psiu05164
Influenza A
psiu05167
Kaposi sarcoma-associated herpesvirus infection
psiu05168
Herpes simplex virus 1 infection
psiu05169
Epstein-Barr virus infection
psiu05203
Viral carcinogenesis
psiu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116758553 (IRF7)
04621 NOD-like receptor signaling pathway
116758553 (IRF7)
04622 RIG-I-like receptor signaling pathway
116758553 (IRF7)
04623 Cytosolic DNA-sensing pathway
116758553 (IRF7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116758553 (IRF7)
09172 Infectious disease: viral
05161 Hepatitis B
116758553 (IRF7)
05160 Hepatitis C
116758553 (IRF7)
05164 Influenza A
116758553 (IRF7)
05162 Measles
116758553 (IRF7)
05168 Herpes simplex virus 1 infection
116758553 (IRF7)
05167 Kaposi sarcoma-associated herpesvirus infection
116758553 (IRF7)
05169 Epstein-Barr virus infection
116758553 (IRF7)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116758553 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116758553 (IRF7)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116758553 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116758553
NCBI-ProteinID:
XP_032497360
Ensembl:
ENSPSNG00000007899
UniProt:
A0A8C9BQZ2
LinkDB
All DBs
Position
8:110037843..110041030
Genome browser
AA seq
473 aa
AA seq
DB search
MAVAPDGGTPRVLFGDWLLGEVSSGRYEGLRWLDAARTRFRVPWKHFARKDLGEADSRIF
KAWAVARGRWPLRSIAGARPTAESALRASWKTNFRCALHCTRRFVMLQDNSGDPTDPHKV
YMVTPGPACGESPGIISQGEDKALEDAPPTRDGLAGLSPEPCAPSPAGDAGDLLIQALQQ
SSLEDHVLKAACGVEPIAPGAPDTGPPPAPWQPGEAEPRTTASPSACTLMAGPLHVAGPT
CSQLGLHTLPSLGALDLTITYKGRTVLQAVVGRPSCVLLYGPPDGGGGASEHQRVAFPSP
AQLPDQKQLHYTEKLLQHVAPGLQLELRGLRLWARRLGKCKVYWEVGGPLGSASSSTPAR
LLPRNCDTPIFDFSTFFQELGEFEACRRRGSPHYTIYLGFGQDLSVGRPKEKSLVLVKLE
PWLCRAYLEGVQREGASSLDSGSLSLCLSSCNSLYDELEHFLEHFLMEAEQPG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctcccgacggggggaccccgcgcgtgctcttcggagactggcttctgggc
gaggtcagcagtggccgctacgagggactacggtggctggacgcggcccgaacgcgcttc
cgcgtgccctggaagcactttgcgcggaaggacctgggagaggccgactcgcgcatcttc
aaggcctgggctgtggcccgcggcaggtggcctctccgcagcatcgcaggtgcccggccg
accgccgagagtgcgctccgagcttcctggaaaaccaacttccgctgcgcgctgcattgt
acgcggcgcttcgtgatgttgcaagacaactcgggggaccctaccgaccctcataaggtg
tacatggtcacccccgggccggcgtgcggagaaagcccaggcattattagccagggggag
gacaaggcccttgaagatgccccacctacaagggatgggctggccgggctgagccctgag
ccctgtgccccaagcccagccggagatgctggggacctactgatccaggctctgcagcag
agctccctggaggaccatgtgctgaaagctgcgtgtggggtggagccgatagcccctggg
gctcctgacacgggcccacccccagccccctggcagcccggagaggcggagccccgcacc
acagcctcccccagtgcctgcaccctgatggcagggcctctgcacgtggctggtcccacc
tgctcacagctcggtctgcacacactgcccagcttgggggccctggacttgaccatcacg
tacaagggccgaacagtgctgcaggcggtggtggggcgcccgagctgtgtgctcctgtat
ggcccccccgatggaggtggtggcgcttcagagcaccagcgagtagcctttcccagcccc
gcccagctgcccgaccagaagcagctccactacacagagaagctgctgcagcacgtagcc
ccaggcctgcagctggaactgcgcggtctcaggctgtgggcccggcgcctgggcaagtgt
aaggtctattgggaggtgggagggcccctgggctcggccagctcctccacccccgcccgc
ctgctgccccggaactgcgacacccccatctttgacttcagcaccttcttccaagaactg
ggggagtttgaggcctgccggcgccggggctcccctcactacaccatctatctgggcttt
gggcaggacctgtcagtgggaaggcccaaggagaagagcctggtcctggtgaagttggag
ccatggctgtgccgggcatacctggagggcgtgcagcgcgaaggcgcgtcctctctggac
agcggcagcctcagcctctgcctttccagctgcaacagcctctatgatgaactggagcac
ttcctggagcacttcctgatggaggcggagcagcccggctag
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