Phocoena sinus (vaquita): 116758579
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Entry
116758579 CDS
T07759
Symbol
MCAM
Name
(RefSeq) cell surface glycoprotein MUC18 isoform X1
KO
K06534
melanoma cell adhesion molecule
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116758579 (MCAM)
04515 Cell adhesion molecules [BR:
psiu04515
]
116758579 (MCAM)
04090 CD molecules [BR:
psiu04090
]
116758579 (MCAM)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of melanoma cells
116758579 (MCAM)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
MCAM
116758579 (MCAM)
CD molecules [BR:
psiu04090
]
Proteins
116758579 (MCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
I-set
C2-set_2
V-set
Ig_5
C2-set_3
C1-set
Psg1
Insulin_TMD
Orf78
Mid2
Motif
Other DBs
NCBI-GeneID:
116758579
NCBI-ProteinID:
XP_032497417
Ensembl:
ENSPSNG00000020982
LinkDB
All DBs
Position
8:13412586..13420610
Genome browser
AA seq
638 aa
AA seq
DB search
MGRSGFICAFLIAACCCCRRAAGVPGEAEQPDPELVEVEVGGTALLKCGPSHSPGNFSHA
DWFSVHKEKPTLIFLVRQGQGQSEPGEYQNRLSLQDQGTTLALARITPHDERIFLCQGKR
PRSQEHRIQLRVYKAPEEPLIQVNALGISVNSEEPGEVATCVGRNGYPLPQVTWYKNSQS
LKEEKNRVHIQSSQIVESSGLYTLRSVLKAQLTKEDKDAQFYCELSYRLPSGNHMKESRE
VTVPVFYPAERVWLEVEPEGMLKEGDRVEIRCLADGNPPPHFSIGKQNLSTREMEEERTD
DNGVLVLEPARKEHSGLYECQGLDLESTASLLSDQQELVVNYVSEVRVSPAAPESQEGSS
LTLTCEAESNQDLEFQWLREKTGKVLAKGPVLQLRNLKREAGGGYRCVASVPSVPGLNRT
QLVNVAIFGSPWMALRERKMWVKENSVLNLSCEASGHPRPSIVWSVDGTASEQDQDPQSV
LSVLNVLVTPELLETGAECVASNSLGRNTTVIILELDSNRTTSLSTSTVSPYARANSTST
EKKLTEPESKGVVIVAVTVCVLVLAVLGAVLYFFYKKGKLPCGRSGKQEITLPPSRKGEF
VVEVKSDKLPEEMGLLQGSNGDKRAPGDQGEKYIDLRH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggacggtccgggttcatctgcgccttcctgatcgccgcctgctgctgctgtcgccgc
gccgcgggtgtgcctggagaggctgagcagcccgaccccgagctggtggaggtggaagtg
ggcggcacggcccttctgaaatgtggcccctcccactccccgggcaacttcagccacgcg
gactggttttctgtccacaaggagaagccaacactcatcttcctcgtgcgtcagggccag
ggccagagcgaacctggggagtaccagaatcggctcagcctccaggaccaagggactact
ctggccctagcacgcatcaccccccacgatgagcgcatcttcctgtgccagggcaagcgc
cctcggtcccaggagcaccgaatccagctccgtgtctacaaagctccggaggagccactc
atccaggtcaatgccttgggcatttctgtgaacagtgaggagcctggggaggttgccacc
tgtgtggggaggaatgggtacccccttcctcaagtcacctggtacaagaacagccagtcc
ctgaaggaggagaagaaccgggtccacatccagtcgtcccagatcgtggagtcgagtggt
ctgtacaccttgaggagcgttctgaaggcacagctgaccaaggaggacaaagatgcccag
ttttactgcgagctcagctatcggctgcccagtgggaaccacatgaaggaatctagggag
gtcactgtccctgttttctacccggcagagagagtgtggctggaagtggagcctgagggg
atgctgaaggagggggaccgcgtggaaatcaggtgtctggctgatggcaaccccccgccc
cacttcagcatcggcaagcagaacctcagcaccagggagatggaggaagagaggaccgat
gacaacggagtcctggtcttggagcccgcccggaaggagcatagcggcctctacgaatgt
cagggcctggacttggaaagcacggcatcgctgctgagcgaccagcaggagctggtggtg
aactatgtgtctgaagtccgggtgagccccgcagcccctgagagccaggagggcagcagc
ctcacgctgacctgtgaggcagagagtaaccaggaccttgagttccagtggctgagagaa
aagacaggcaaggtgttggcaaaggggcctgtgctccaattacgcaacctgaaacgggag
gcagggggaggttaccgctgcgtggcatctgtgcccagcgttcccggcctgaaccgcacc
cagctcgtcaacgtggccatttttgggtccccgtggatggcactaagggagaggaagatg
tgggtgaaggagaactcagtgctgaatctgtcctgtgaagcatcagggcatcctcgaccc
agcatcgtctggagcgtcgatggcacggccagcgaacaggaccaagatccgcagagtgtc
ctgagcgtcctgaatgtccttgtgaccccagagctgttggagacaggtgctgagtgcgtg
gcctccaactccctgggcagaaacaccaccgtcattatcctggagctggactccaacaga
accactagcctcagcacctccaccgtcagtccctatgctagagccaacagcacctccaca
gagaaaaagctgacagagcccgaaagcaagggtgtggtcatcgtggccgtgaccgtgtgt
gtcctggtcctggctgtgctgggcgccgtcctctatttcttctacaagaagggcaagctg
ccgtgcggacggtcaggcaaacaagagatcacgctgcccccgtctcgtaagggcgaattt
gtagttgaagttaagtcagataagctcccagaagagatgggcctccttcagggcagcaac
ggtgacaagagggctccaggagaccagggagagaaatacatcgatctgaggcactag
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integrated database retrieval system
