Phocoena sinus (vaquita): 116758599
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Entry
116758599 CDS
T07759
Symbol
CRTAM
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116758599 (CRTAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116758599 (CRTAM)
04090 CD molecules [BR:
psiu04090
]
116758599 (CRTAM)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
Nectin family
116758599 (CRTAM)
CD molecules [BR:
psiu04090
]
Proteins
116758599 (CRTAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set_2
V-set
Ig_2
ig
Adeno_E3_CR1
DUF4834
FraC
Neur_chan_memb
Herpes_gE_N
SID-1_RNA_chan
C2-set_3
C1-set
Tmemb_9
FtsL_2
Folate_carrier
Borrelia_REV
Cadherin_C_2
Ctr
Motif
Other DBs
NCBI-GeneID:
116758599
NCBI-ProteinID:
XP_032497455
Ensembl:
ENSPSNG00000018597
LinkDB
All DBs
Position
8:complement(10111862..10144180)
Genome browser
AA seq
363 aa
AA seq
DB search
MWWRLCSLLAWFPLQEAFQTDHMETVTVEEGQTLTLKCVISQAETTSLQWLAPSGFTIFF
SEHSGLKNSKYQLLHYASNQLSIRVLNVTQQDEGVYKCLHYGNSVRTKEVKVIVLATPVK
PTLEVSARMQNGEHVLLKCSTVRSKPPPQITWLLGDDMELQGETHHEYETDGKKCNSTST
LRVHTYGKNSTASCIVRHKGLQGRKLVAPFRFEDLVTDQETVSAALETSSPSSQDPQQST
STEANRQFVGLTRKNSGYLLLSLVSFLIFILFIIVQLFIMKIRKAHVIWKKENEISEHTL
ESYRSRSNNEETSSQENNSQTSRSKSCMNYITQLYSEAKTKTKEKAQPSKFKGELTHIQE
SIV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggaggctttgcagcttgctggcttggttccccttacaagaggcctttcagacc
gaccacatggaaaccgtcaccgtggaggaaggccagacactcactctaaagtgtgtcatt
tctcaggcggagaccacctccctgcagtggctggccccatcgggcttcaccattttcttc
agtgagcattccggtttaaaaaattccaaataccagcttcttcattacgcctccaatcag
ctctccatcagggtgctgaatgtaacacagcaagatgaaggcgtgtacaagtgtctgcat
tacggcaactccgtgagaacaaaggaagtgaaagtgatcgtgttagcaactcctgtcaag
ccaaccttggaagtttccgctagaatgcaaaatggagaacatgtcctactgaaatgctcc
actgtgagaagtaagccccctccacagataacctggctcttaggggatgacatggagctc
caaggtgaaacccaccatgaatatgaaactgatgggaagaagtgtaatagcaccagcaca
ctcagagtccacacatatggcaaaaactcaacagcgagctgcatcgtccgacacaaaggc
ctgcaaggaagaaaactggtagcccctttccggtttgaagatttggttactgatcaagag
acagtttcagctgccctggagacaagctctccatcctctcaagaccctcagcagtccact
agtaccgaagcgaatcgtcagtttgtggggctgacgaggaagaatagtggctacctgctg
ctgagcctcgtctccttcctcattttcattctcttcatcatcgtccagctcttcatcatg
aagattcggaaagcacatgtcatatggaaaaaagaaaatgaaatttcagagcacactcta
gaaagttacagatcgaggtcaaataatgaagaaacatcatcccaagagaataatagtcaa
acttcccgctctaagagctgcatgaactacatcacacagttgtactcagaggcaaaaaca
aagacgaaagaaaaggcacaaccttcaaaattcaaaggagagctcactcatatacaagag
agcatcgtgtag
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