Phocoena sinus (vaquita): 116758685
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Entry
116758685 CDS
T07759
Symbol
CDHR5
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116758685 (CDHR5)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Cadherin related
116758685 (CDHR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
MauE
PCC_BT
Motif
Other DBs
NCBI-GeneID:
116758685
NCBI-ProteinID:
XP_032497616
Ensembl:
ENSPSNG00000007809
LinkDB
All DBs
Position
8:110030611..110036790
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AA seq
851 aa
AA seq
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MVTWALLLPLLVAVAQAQGTGGSGRGAGRQAGCWRAPTLPLQLPVCSVEKTSFEVSENTS
PGQLLLNITVPEGQQVTLGPSPTRFAFRIQGTQLFLNVTPDYEENSMLVAVLECKRADAV
VTSLRVFVSVLDVNDNPPRFPFVVKVQRVPEDTKVNAVVIPETELKAQDLDKDDILFYTL
QEVTPGASGFFSLVGANRPELRLDRSLDFDRWPNMTFQLLVRVSRPLPPSSRAPTAPPEP
LQPQAPRPDGRAAGLQDTREESAEPSHSATATLVLEVRPADLRAPWFLPCTYSDGFVCLE
AQYHGAVPTGHTLSGPLILHPGPIYAVDGDRGIHQPIVYSIIGGNEDGSFSIDANTGNLT
MTKSIPSPKTFLLLVKGKQADHARYSVTQVTVEAQAASGRPPRFPQSLYRGTVALGSGVG
VAIKDAAAPSQPLRIRAQDPEFPVGTAWSLGLPGLLLWGGLERSGEQPGLRTHWGHVQDL
NLAITYRVTNNSNFRMDGEAMLTGASLVHAGVFYAEVEARNTVTSGTATTVVEVQVSEQE
PAPTGPPTSPETAGTTGASSGTTSEAPRPPEPSWGSSTTSSGGDSSPHPSSGTTLRPPAS
SMPGGPPSVGTSLSLPSASPSGGSAQTSKPGTSLPTSPGPSRTPRPTAGTPGTSARRIED
LRFSVVDMAALGGVLSALLLLALIALIVLVHKHYGHRLKCCCGKALEPQPQGFDNQAFLN
NPDEASWAPAPSPSSSPVPLAPPEPAPPEPKPASPETLRRVAESPTVALDGDGPAAVRSI
LTKERRPEGGYKAVWFGEDIGAEADVVVLNTPASEVDGAGDEGSEGSGDEGAEVGLRGGA
QDAPRSDSIYL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggtgacttgggccctactgcttcctctgctcgtggccgtggcccaggcccagggtact
gggggcagtggcagaggggcggggcggcaggcagggtgctggcgggcaccaacccttcct
ctccaacttccagtctgctctgtggaaaagacctccttcgaagtcagtgagaacacgagt
cccgggcagctacttctcaacatcaccgtccctgagggccagcaggtgaccctcgggccc
tcgcccacccgtttcgcatttcggatccaggggactcagctgtttctcaatgtgaccccg
gactacgaggagaactcaatgctggtagcagtcctggagtgcaagagggctgacgctgtg
gtgaccagcctgagggtgtttgtgtcagtgctggatgtcaacgacaacccgcccaggttc
ccctttgtagtcaaggtccaaagggtgccggaggacactaaagtgaatgccgtcgtcatc
cccgagacagagctgaaggcccaggacctcgacaaagatgacatcctgttctacaccctc
caggaagtgaccccgggtgccagcggcttcttctctttggtgggcgcgaaccgcccagag
ctgcggctggaccggtcactggacttcgacaggtggccgaacatgaccttccaactgctg
gtccgggtgagcaggccactcccgccctcatcccgggcgcccacggccccacccgagccg
ctccagccgcaggcccccaggcctgacggcagggctgcggggctgcaggacacgcgagag
gagagcgcggagcccagccactcggccacagccaccttggtcctggaggtgcggcccgcc
gacctgcgggccccctggttcctgccctgcacatactctgacggttttgtctgcctcgaa
gcccagtaccacggggctgtgcccacaggccacacactgtcaggacccctcatcctgcat
cctgggcccatctacgctgtggacggggaccggggcatccatcagcccattgtgtacagc
atcatcgggggaaacgaggatggctcgttctccattgatgccaacacaggcaacctcacc
atgaccaagagcatccccagccccaagaccttccttctgctggtcaagggcaagcaggcg
gatcacgccaggtactcagtgacccaggtcacggtggaggcccaggccgccagtgggagg
ccgccccgcttcccccagagcctgtaccgcggcaccgtggcgctcggctctggggtgggc
gtggccatcaaggatgcagctgccccctcccagcctctgaggatccgggcccaggatcct
gagttcccagtaggcaccgcctggtccctgggtctgcccggcctcctgctgtgggggggg
ttggagcggtctggggagcagcctgggctcaggactcactggggccacgtccaggacctc
aacttggccatcacgtatcgggtcaccaacaactctaacttcagaatggacggggaggcc
atgctgactggcgcttcactggtgcacgccggggtcttctatgcagaggttgaggccagg
aacacggtgacctcaggcacagcgaccacggtcgtggaggttcaagtctcagaacaggaa
cccgcccccacaggcccccccacgtccccagagacagcaggaacaaccggagcctccagc
ggcaccacatcagaagcccctcggccccctgagccctcttgggggtcctccacgaccagc
tctggtggggacagcagcccacacccctcctcaggcacaactctgaggcctccggcctcc
tccatgcctggggggccccccagtgtgggaaccagcctctccttgccatcagcctcaccc
agtgggggctcagcacagacctcaaagccaggaacctctctgccaacgtcccctggaccc
agcaggaccccccggcctacagcagggacgcctgggaccagtgcaagacgcattgaggac
ttgcgcttctcggtggtggatatggcggcgctgggcggggtgctgagcgcgctgctcctt
ctggctctcatcgccctcatagtcctcgtccacaagcactacggccaccgactcaagtgc
tgctgtggcaaagcgctggagccccagccccaaggctttgacaaccaggccttcctcaac
aaccctgacgaggccagctgggcgccggctcctagcccctcatccagtcccgtcccgctg
gctcccccagagcctgcacccccagaacccaagcccgccagcccggagaccctccgccga
gtcgccgagtcccctacggtggccctggatggggacggcccggccgctgtgaggtccatc
ctgaccaaggagcggcggcctgagggtggctacaaggcggtgtggttcggcgaggacatc
ggggccgaggccgacgtggtggtcctcaacacgcctgcctcggaagtggacggtgctggc
gacgagggcagcgagggcagcggcgacgagggcgcagaggtgggcctgcgcgggggtgcc
caggatgcgcctcgctccgactccatctacctctag
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