Phocoena sinus (vaquita): 116758732
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Entry
116758732 CDS
T07759
Symbol
RRP8
Name
(RefSeq) ribosomal RNA-processing protein 8 isoform X1
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116758732 (RRP8)
Enzymes [BR:
psiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
116758732 (RRP8)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116758732 (RRP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
SF1-HH
Ubie_methyltran
YfhD
Anamorsin_N
Motif
Other DBs
NCBI-GeneID:
116758732
NCBI-ProteinID:
XP_032497750
Ensembl:
ENSPSNG00000010553
LinkDB
All DBs
Position
8:complement(61612874..61637262)
Genome browser
AA seq
468 aa
AA seq
DB search
MFEEPEWAEEAPVVADLGSVALRPRTTADSQIKGSKHRQLLATLRALEAASLPQQPPSLP
GSDEEDEEEVVQRKKKLPKKVLFASTSPEVKKKRKKKRQKQGPPSSDSKEEEVERKKCHK
GALLGNDFAAEEKRKRKCQKQDPSNPAQPLDNVDQTGSKAWNSSAANDSTKPSPETPCSN
PPHTLSRKQWRNRQKNKRRQKNKFRLPQAPEQAPATAAAEETEVSPAPSPDSHGARAEAL
RARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDR
IARDLHQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVD
VAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLGAVTKLGFKVISKD
LTNSHFFLFDFQKTGPPRVGPKAQLSGLKLQPCLYKRSFPLWHPFGRT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggagccggagtgggccgaggaggccccagtagtcgcggacctcgggtctgta
gccttacggcctcggaccacggccgactcgcaaatcaagggctccaagcaccgccagctc
ttggccacattacgggccctggaggcagcatctcttccccagcagccccccagtctgcct
ggcagtgacgaggaggacgaggaggaggtggtgcaaagaaagaagaaactcccaaaaaag
gtcttgtttgccagcacttctcctgaagtaaagaagaaaaggaagaagaaacgtcaaaaa
cagggcccacctagcagtgactccaaggaagaggaagtggaaaggaagaagtgccacaaa
ggggctcttcttggcaatgactttgctgcagaagagaaaagaaagaggaaatgccagaaa
caggacccttcaaatcctgcccagcccctggacaatgttgaccaaactggttccaaagcc
tggaattctagtgctgcaaatgactccaccaagccaagccctgagaccccttgctctaat
cctccgcataccttgagtcgcaagcagtggcggaaccggcagaagaacaagcgtagacag
aagaacaagtttcggcttcctcaggcgccagagcaggccccagccacagccgccgcagag
gagacagaggtgtctcctgcccccagtccagacagccatggagcccgggcggaggctctg
cgagcccgcatggcccagcggctggatggtgcccggttccgctacctcaatgaacagctg
tactcagggcccagcagtgctgcgcagcgcctcttccaggaagaccctgaggcctttctc
ctctaccaccgtggcttccagagccaagtcaagaagtggccactgcagccagtggaccgc
attgccagggatcttcaccagcggcctgcgtccctggtggtggctgactttggctgtggg
gactgccgcctggcttcaagtatccggaaccctgtgcactgcttcgacttggcctctctg
gacccccgggtcactgtgtgtgacatggcccaggtgcctctggaggatgaatctgtagac
gtggctgtgttctgcctttcactgatgggaaccaacatcagagacttcctagaggaggca
aatcgagtgctgaagccagggggtctcttgaaagtggctgaggtcagcagccgctttgaa
gatgttcggacctttctgggggctgtcaccaaactgggcttcaaggtcatctccaaggac
ctgaccaacagccacttcttcttgtttgactttcaaaagactgggcctcctcgggtcggg
cccaaggctcaactctcaggcctgaagctccagccttgtctctacaagcgcagtttccct
ctatggcatccctttggcagaacctaa
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