Phocoena sinus (vaquita): 116758756
Help
Entry
116758756 CDS
T07759
Symbol
PRDM2
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00310
Lysine degradation
psiu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116758756 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116758756 (PRDM2)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116758756 (PRDM2)
Enzymes [BR:
psiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
116758756 (PRDM2)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116758756 (PRDM2)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116758756 (PRDM2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2H2_11
PyrI_C
Motif
Other DBs
NCBI-GeneID:
116758756
NCBI-ProteinID:
XP_032497835
LinkDB
All DBs
Position
1:10419373..10456671
Genome browser
AA seq
1503 aa
AA seq
DB search
MRDSVEGPRDEDEKPSASAAEQTAALQEVVSQDVPSGARPPAPAQDPQVGPAAELDAARS
DANDAEEEEEEEGEEEELDEEDXAAAAGVPGGSAAVESWRLRLXREPEDLLEEPRTVSDG
ALEDSPEVAPAVRIPKAKEEANGDVFETFLFPCQHCERKFTTKQGLERHMHIHMSTVNHA
FKCKYCGKAFGTQINRRRHERRHEAGLKRKPSLATPATGSPGDGQAPGDGTPPKDDAQPP
SLGQDSLTLNSEKASQDTVNSSVVEGNGEVKELHPCQYCKKVFGTHTNMRRHQRRVHERH
LIPKGVRRKGGLLEEQQPPAEQALPAQSVYVPSTEPEEEGEADDVYIMDISSNISENLNY
YIDGKIQTSCSTSNCDVIEMESSSADLYGINCLLTPVTVEITQNIKTTQVPITDDLPKEP
SSSTNSESKKRRTASPPVLPRIKAETESDAVAPSCSLSLPLSISTTEAVPFHKEKNVYLS
SKLKQLLQTQDKLTPPAISATEIPKLGPVCVSTPASMLPVTSSRFKRRTSSPPSSPQHSP
ALRDFGKPGDGKAMWTEAVLSSKKPKLESHSNSPAWSLSGRDERETGSPPGFDEYKVSKE
WAASSTFSNVCNQQPLDLSSGVKQKAEGTGKAPVQWESVLDLSVHRKPSSDSEGKEXQEN
HSVQPACSAAKTKKPTTCMLQKVLLNEYNGVDLPVENAPDVTRSPSPCKPLDPQPDLTFG
PDSSLPAPPGESPPLSPAPQASSLSXGQLPPLLTPTNPSSPQPCPPVLTVAHPPPPLLPT
VPLXSPSSGASPHPCPSPLSNATAQSPLXILSPTVSPSPSPIPSVEPLTSAASPGPPTLS
SSSSSSASPSFSSSSSSSSPSPPPLSAVSSVGFLWDNLEASLPMISFKQEXLESEGPKAR
EESQSATVRDIVQETFNKNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKAK
TDLSEHRFLLHGVGNIFVCFGLXKEFAFLCNLQQHQRDLHPDTVCTHHEFESGTLRPQNF
TDPSKXHVEHMQSLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQH
YPSFKPPPFQYHHRNPLGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILA
CASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKNAFRRMGQPXRLNFSVELSKMSS
NKLKLNALKKKNQLVQKAILQKNKSAKQKADLKNAPESSSHICPYCNREFTYIGSLNKHA
AFSCPKKPLSPSKKKASHSSKKGGHPSPASSDRNSGSSHRRRTADAEIKMQSMQAPLGKT
RARSSGPAQVPPPSSSFRSKQNVKFAASVKSKKPSSSLRNLSPIRMAKMTHSESKKPKAA
AKNHAAQLSGKTSRSLHVRAQKSRAVLQSKSALASKKRTDRFSVKSRERSGGPITRSLQL
TAAADPSENRREDSSGKQELKDFSYSLRLASRCPPPAAPYITRQCRNVKATAAAQFQGSL
FKE
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgagagattctgtggaaggccccagagacgaagacgagaagccttccgcgtccgccgcc
gagcagacggctgcccttcaggaggtggtgagtcaggatgtgccctctggagcccgccct
cccgccccagcccaggacccccaggtgggaccggccgcagagctggacgcggcgcgtagc
gatgcgaacgacgcggaggaggaagaggaggaggagggggaggaggaggagctggacgag
gaggatnnggcggcggcagctggcgtgccaggcgggagcgccgcggtggagagctggaga
ttgcggttgtgacgagagccagaggatctgttagaagagccacggactgtttccgatggc
gctcttgaagactctccggaggtagcacctgccgtcagaattcccaaagctaaagaagag
gccaatggtgacgtgtttgaaacgtttctgttcccgtgtcagcactgcgagaggaagttc
acgaccaaacaggggctggagcggcacatgcacatccacatgtccacggtaaaccacgcc
ttcaagtgcaagtactgcgggaaggcgttcggcacgcagatcaacaggcggcggcacgag
cggcgccacgaggcggggctgaagcggaagcccagcctggcaactccggccaccggaagc
cccggcgatggccaggcgcccggggacggcactcctccgaaggatgacgcgcagcctccc
agtcttgggcaagactctctgaccttgaattcagagaaggcttcccaagacacagtaaat
tcttctgtagtagaagggaacggagaagttaaggagctccatccctgccaatactgtaaa
aaggtttttggaactcacactaacatgaggcgacatcagcgcagggtacacgagcgtcac
ctgattcctaaaggtgtgcggcgaaaagggggtctcctcgaagagcagcagcccccggca
gagcaggccctgcccgcccagagtgtctacgtacccagcacagagccagaggaggaaggg
gaggcagacgacgtgtacatcatggatatttctagcaatatctcggaaaatttaaattac
tacattgatggtaaaattcagaccagctgcagcaccagtaactgtgatgttattgagatg
gaatccagttcggcagacttgtacggtatcaactgtctgctcactccggttacagtggaa
ataactcaaaatataaagaccacacaggtccctataacagatgatcttcctaaagagcct
tccagcagcacgaacagtgagtccaagaaacggaggactgccagtcctcctgtgttgccc
agaattaaagctgagaccgagtctgatgccgtagcaccttcgtgttccttgagcctgcct
ctcagcatatcaaccacagaggccgttccgttccacaaagagaaaaatgtgtatttgtca
tcgaagctcaaacaacttcttcaaacgcaggataaactgactcctcctgcaatttcagcc
actgaaatacctaaattaggtcctgtctgtgtgtccacgcctgcgtcgatgctccctgtg
acctcgagcaggtttaagaggcggaccagctctccccccagctctccacagcacagtcct
gcccttcgagactttgggaagccgggcgatgggaaagccatgtggactgaggcagttctg
agttccaaaaagcccaaattagaaagtcatagcaactcaccagcatggagtttgtctggg
agagatgagagagaaaccgggagccctccaggctttgatgaatataaagtatctaaagag
tgggcagctagttctacttttagcaacgtatgcaaccagcagccactggatttatccagt
ggtgtaaaacagaaggctgagggtacaggcaaggctccagtccagtgggaatctgtgtta
gatctcagtgtgcatagaaagcctagtagtgactctgaaggcaaggaanntcaagaaaac
cattcggtgcagccagcctgcagcgctgcaaagacaaagaagccaaccacctgcatgcta
cagaaggtccttctcaatgaatacaatggcgtcgacttacctgtagaaaatgctccagat
gtgaccaggagccccagtccttgtaaacccctagatcctcagccggacctgaccttcggt
cccgactctagcttacctgcccctcctggcgagtctcctcctttgtcacctgccccgcag
gcatcttccctttctntcgggcagctgccgcctctcttgaccccaaccaatccctcttcc
ccccagccctgtcctcctgtgttaactgttgcccaccccccccctccgctgcttcccact
gtacctcttngcagcccctcttccggggcatcccctcatccgtgtccctctccactctcg
aacgccaccgcacagtccccacttncaattctttccccaacggtgtctccctcgccatct
cccattccttccgtggagcccctcacgtctgctgcctcaccggggcctccgacgctctct
tcgtcttcctcctcatctgcttcgccttcgttctcttcttcgtcctcctcctcttctcct
tcgccacctcctctctcagcagtatcgtctgttggtttcctctgggataatctggaagcc
tctctccccatgatatcttttaaacaggagngattagagagtgaaggtccgaaagcgagg
gaagaatcccagtctgccaccgtgcgggatatcgttcaggagacattcaacaaaaatttt
gtctgcaacgtctgtgaatcacctttcctttccattaaagatctaaccaaacatttatcc
attcacgctgaggaatggcccttcaaatgtgaattttgtgtgcagctctttaaggctaaa
accgatttgtcagaacatcgctttttgcttcatggagttgggaatatctttgtgtgtttc
ggtttgtaaaaagaatttgcgtttttgtgcaatctgcagcagcaccagcgagatctccac
cccgatacggtgtgcacacaccatgagtttgaaagtggcaccctgaggccccagaacttc
acggatcccagcaagngccacgtagagcatatgcagagtttgccggaagatcctttagaa
acgtctaaagaagaagaggagctgaacgattcctcagaagagctttacacgaccataaag
ataatggcttctggaataaagacgaaagatccagatgttcgattgggtctcaatcagcat
tacccaagctttaaaccacctccatttcagtaccatcaccgcaaccccctaggcattggt
gtgacggccacaaatttcactacacacaatatcccacagacgtttactaccgccattcgc
tgcaccaagtgtgggaaaggtgtggacaacatgcctgagctgcacaaacacatcctggcg
tgtgcttccgctagcgacaagaagaggtataccccgaagaaaaatccagtcccgctgaaa
cagactgtgcagcccaaaaacggtgtggtggttttggacaactctgggaagaatgccttc
agacgaatgggacagccanaaagactgaactttagcgtcgagctcagcaaaatgtcctca
aataagctcaagttaaacgcgttgaagaaaaaaaaccagcttgtccagaaagccatcctt
cagaaaaacaagtctgcaaagcagaaagccgacctaaaaaatgctcctgagtcgtcctcg
cacatctgcccgtattgcaacagagagttcacgtacatcgggagcctgaacaagcacgcc
gctttcagctgtcccaagaaacctctttctccttccaaaaaaaaagcttcccattcatcc
aagaagggaggacacccatcacctgcaagtagtgacagaaacagcggcagcagccaccgc
agacggacagcggatgcagagatcaaaatgcagagcatgcaggcgcctttgggcaagacc
agagctcgcagctcgggccctgcacaggtcccaccgccctcctcgtccttcaggtccaag
cagaatgttaaatttgcagcttcggttaagtccaaaaaaccaagctcctccttaaggaac
ttaagcccgatacgaatggccaaaatgactcacagcgagagcaagaagcccaaggctgca
gccaagaatcatgcagctcagctctcgggcaagacgtctcggagcctgcacgtgagggca
cagaaaagcagagctgtcttacagagcaaatcggccttggccagtaagaaacggacagac
aggttcagtgtaaaatctagagaacgaagtggggggccaatcacccgaagcctgcagctg
acagctgctgccgacccgagtgagaacaggagggaggacagcagcggcaagcaggagctg
aaggacttcagctacagtctccgcctggcatctcgatgtcctccgccagctgccccgtac
atcaccaggcagtgtaggaatgtcaaggccacagctgcagcccagttccagggatccctc
ttcaaagagtag
DBGET
integrated database retrieval system
