Phocoena sinus (vaquita): 116758759
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Entry
116758759 CDS
T07759
Symbol
STX5
Name
(RefSeq) syntaxin-5 isoform X1
KO
K08490
syntaxin 5
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116758759 (STX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116758759 (STX5)
Membrane trafficking [BR:
psiu04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
116758759 (STX5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF16
Vac_Fusion
MCPsignal
DUF5063
Motif
Other DBs
NCBI-GeneID:
116758759
NCBI-ProteinID:
XP_032497799
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Position
8:complement(101434297..101462680)
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AA seq
355 aa
AA seq
DB search
MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVALVPPLPDTMSCRDR
TQEFLSACKSLQSRQNGIQTNKRTLRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAK
RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQ
SKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESRAS
GDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEET
IQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcggaaacgctacgggtctaagaacacggatcagggtgtctacctgggtctc
tcaaagacacaggtcctgtcccctgcaactgctggcagtagcagcagcgacatcgcccct
ctgccccccccagtggccctggtccctccccttcccgacaccatgtcctgccgggatcgg
acccaggagttcctgtctgcctgcaagtccctgcagagccgtcagaatggaatccagaca
aacaagcgaactctgcgtgccgtccggcagcgcagtgaattcaccctcatggccaagcgc
attgggaaagacctcagcaacacatttgccaagctggagaagctgacaatcttggcaaag
cgcaagtccctctttgatgataaagcagtggaaattgaggagctaacttacattatcaaa
caggacatcaatagccttaacaaacaaatcgcccagcttcaagatttcgtgagagccaag
ggcagccagagcggccggcacctgcaaacccattccaacaccatcgtggtctccctgcag
tcaaaactggcctccatgtccaatgacttcaaatcagttttagaagtgaggacagagaac
ctgaagcagcagaggagccggcgggagcagttctcccgggcacccgtgtcagccctgccc
cttgcccccaaccacctagggggcggtgctgtggttttgggggcggagtctcgagcctct
ggggacgtggccattgacatgatggactctaggaccagccagcagctgcagctcattgat
gagcaggattcctacatccagagtcgggcagacaccatgcagaatattgagtccacaatt
gttgagctgggctccatcttccagcagttggcacacatggttaaggaacaggaagagacc
attcagaggatcgacgagaacgtgctgggagcccagctggatgttgaggccgcccactca
gagatcctcaagtacttccagtcggtcacctccaaccggtggcttatggtcaaaatcttc
ctcatcctcattgtgttcttcatcatctttgtggtcttccttgcctga
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