Phocoena sinus (vaquita): 116758993
Help
Entry
116758993 CDS
T07759
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116758993 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116758993 (EXOSC10)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
116758993 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
116758993
NCBI-ProteinID:
XP_032498058
Ensembl:
ENSPSNG00000010040
UniProt:
A0A8C9E217
LinkDB
All DBs
Position
1:complement(8617400..8638166)
Genome browser
AA seq
935 aa
AA seq
DB search
MALPSPRESKAQSATSDTKSDGEMVLPGFPDADSFVKFALGAVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDQNKVTELEDKFDLLVDANDVI
LERVGILLDEASGVNKNQQPVLPAGLQVPKTIVSSWNRKAGEYSKKTKCETFRLLHAKNI
IRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRECPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPEPQLYRPVGETPCHFVSSLDELVEL
NEKLLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQ
LADWRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPTQLQVEWQRSRDICLKK
FIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVAAGVRKDGPPPNPE
RLENALFGPHDCSHAPSDGCPLIATNGPVPVQKQEGLPTAREEEEALPDSGCLIATAVIT
LFNEPSAEENGKGPLTVAQKKAQNIMESFENPFRMFLPSLESRAHVSQTAKFDPSSKIYE
ISNRWKLASQVQVQTESKGTAKKKAAEHTAARDQAKEECRAAAEQAVSVRQQAALENAAK
KRERTTSDPGTTEQKQDKKRLKISKKLKDPDPPEKDFTPYDYSKSDFKAFAGDSKSTPSS
QFDPNKQPPSGKKHPEMSSCKKTKVTPVALESLMGHLSSGVFSCASCSHGCHSASMASFQ
KCTAAKKIKQSMGNKSMSFPTGKSDRGFRHNWPKR
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcccagtccccgagagtctaaggcccagtcggcgacaagcgataccaagtct
gacggggagatggtgctgcccggcttccccgatgcagacagcttcgtgaagtttgctctt
ggggcagtggtggcagtcaccaaggcatctgggggcctaccacagtttggtgatgagtat
gatttttaccgaagttttcctggcttccaggcattttgtgaaacacagggagacaggttg
cttcagtgcatgagtagggtaatgcagtaccatggatgtcgcagcaacattaaggatcag
aataaagtgactgagctggaggacaagtttgatttgctagttgatgccaatgatgttatt
ctggaaagagtgggcattttactggatgaagcatcaggtgtgaataagaatcaacaacct
gtcctccctgcaggattgcaggtccctaaaaccatagtgtccagctggaaccggaaggca
ggagaatatagcaaaaaaacaaaatgtgaaacattccggctgcttcatgcaaaaaacatc
atccggcctcagcttaaattccgagagaagattgacaattccaacacgccatttcttcct
aaaatcttcatcaagcccaatgctcagaaacccctccctcaggcactctctaaagaaagg
cgggagtgcccacaggaccgaccagaggacttggatgtcccccctgccctggcagatttc
atccaccagcagagaacccagcaggtggagcaggacatgtttgcacatccttatcagtac
gaactagatcacttcactccaccagactcagtccttcaaaagccagagcctcagttatac
agacctgtaggagagacaccctgccacttcgtgtcctcgctggatgaactagtggaactc
aatgaaaagctcctgaagtgtcaagaatttgctgtagacttggagcaccactcttaccgg
agcttcctagggctcacctgcctgatgcagatttccacccggacagaagacttcatcgtt
gacaccctggagcttcgcagtgacatgtacattctcaatgagagcctcacagacccggct
attgttaaggtcttccacggtgccgattcagacatagaatggctacagaaggactttggg
ttgtacgtggtgaacatgtttgatacccatcaggcagcacgccttcttaacctgggcagg
cactccctcgaccatctgctgaagctctactgcaacgtggaatcaaacaagcagtatcag
ctggccgattggagaatacgacctctgcctgaggaaatgctcaactatgcccgagacgac
actcattacttgctttacatctatgataagatgaggctggagctgtgggagcgtggcaac
gagcagcccacgcagctgcaggtggagtggcagcggagccgtgacatctgcctcaagaaa
ttcatcaaacctatcttcacggatgaatcttacctggaactgtatagaaagcaaaagaaa
catctcaacacacagcaactaacggcctttcagctgctgtttgcctggagggataaaaca
gctcgcagggaagatgaaagttatggatatgtcctgccaaaccatatgatgctaaagata
gctgaggaactgcccaaggaacctcagggcatcatagcctgctgtaaccctgtgccacct
cttgtacggcagcagatcaatgaaatgcatcttttaattcagcaggcgcgagagatgccc
ctgctcaagtctgaagttgcagctggagtgaggaaggacgggccaccgcccaaccctgag
agattggagaatgctctcttcggcccccacgactgctcccacgccccgtcagacggctgt
cctctcattgcaaccaatgggcctgtgccggtgcagaagcaggagggcctccccactgcc
cgagaagaagaggaggccctgccggactctggatgccttatcgctaccgctgtcatcacg
ttatttaacgaacctagtgctgaggaaaatggaaagggtccattaacagttgcacagaaa
aaagcccagaacataatggagtcctttgaaaatccatttcggatgtttctgccttcacta
gaatcccgggctcacgtttctcagacagcaaagttcgatccatcttcgaaaatctatgaa
atcagcaaccgttggaagctggcaagccaggtacaggtacaaacagaatctaaaggaacc
gccaagaagaaggcggctgagcacacagccgcccgggaccaggccaaggaggagtgcaga
gcagcagcggagcaggctgtgtccgtccgccagcaggctgccctagagaacgctgccaag
aagagggaacgaacaacaagtgacccagggacgacagaacagaaacaagacaagaaacga
ctcaaaatttccaagaagctaaaagacccagatccaccagaaaaagattttaccccatat
gactacagcaagtcggatttcaaggcttttgctggagacagcaaatccacaccttcttcc
cagtttgacccaaataagcagccaccgtctggcaagaaacacccagaaatgtccagttgc
aagaaaaccaaagtcacaccagtggcgctggagtccttgatgggccatctgagctcaggg
gtgttttcctgtgcgtcttgcagtcatggttgtcactcagcttcaatggcttcttttcag
aaatgcactgcagccaaaaaaattaaacagtcgatgggaaacaaaagcatgtcttttcca
actggaaagtcagacagaggtttcaggcacaattggccaaagagatag
DBGET
integrated database retrieval system
