Phocoena sinus (vaquita): 116758999
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Entry
116758999 CDS
T07759
Symbol
HOXA1
Name
(RefSeq) homeobox protein Hox-A1 isoform X1
KO
K09301
homeobox protein HoxA/B/D1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116758999 (HOXA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116758999 (HOXA1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116758999 (HOXA1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PHC2_SAM_assoc
DUF7255
Glu_cys_ligase
Motif
Other DBs
NCBI-GeneID:
116758999
NCBI-ProteinID:
XP_032498061
Ensembl:
ENSPSNG00000014773
UniProt:
A0A8C9E5X5
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Position
9:49426386..49429074
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AA seq
331 aa
AA seq
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MDNARMSSFLEYPILSGSDSGTCSARAYPSDHGITTFQSCAVSANSCGGDDRFLVGRAVQ
ISPPHHHHHHHPQPATYQTAGNLGVSYSHSSCGPSYGAQNFGAPYSPYALNQEAEVSGGY
PSCAPAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQYIHHSYGQEHQSLALATYNNSLSPL
HASQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFTTKQLTEL
EKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPATPTGSE
EKAEESSEKSSSSPCVPSPGSSTSDTLPTSH
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcaagaatgagctccttcctggaataccccatcctcagcggtagcgactcg
gggacctgctcagcgcgagcctacccctccgaccacggaattacaactttccagtcgtgc
gcggtcagtgccaacagctgtggcggcgacgaccgcttcctagtgggcagggcggtgcag
atcagcccgccccaccaccaccaccatcaccacccccagccggccacctaccagactgct
gggaacctgggggtatcctactcccactcgagttgtggtccaagctacggcgcgcagaac
ttcggcgcgccttacagcccctacgcgttaaatcaggaagcagaagtaagtggtgggtac
ccctcgtgcgctcccgctgtttactctggaaatctctcatctcccatggtccagcatcac
caccaccaccagggttatgccgggggcgcggtgggctcgcctcagtacattcaccactca
tatggacaagagcaccagagcctggccctggccacgtataataactccttgtcccctctc
cacgccagccaagaagcctgtcgctcccctgcatcagagacatcttctccagcacagacc
tttgactggatgaaagtcaaaagaaaccctcccaaaacagggaaagtcggagagtatggc
tacgtgggtcaacccaatgcagtgcgtaccaacttcactactaaacagctcacggagctg
gagaaggagtttcacttcaacaagtacttgacgcgtgcacgcagggtggagattgccgca
tccctgcagctcaatgagacccaggtgaagatctggttccagaaccgccgaatgaagcag
aagaaacgagagaaggagggcctcttgcccatctctccagccactccgacgggaagcgag
gagaaggccgaggaatcctcagagaagtccagctcctcaccctgcgttccttccccgggg
tcttctacctcagacactctacctacctcccactga
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