KEGG   Phocoena sinus (vaquita): 116759009
Entry
116759009         CDS       T07759                                 
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
  KO
K01880  glycyl-tRNA synthetase [EC:6.1.1.14]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    116759009 (GARS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:psiu01007]
    116759009 (GARS1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psiu03016]
    116759009 (GARS1)
   03029 Mitochondrial biogenesis [BR:psiu03029]
    116759009 (GARS1)
Enzymes [BR:psiu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     116759009 (GARS1)
Amino acid related enzymes [BR:psiu01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   116759009 (GARS1)
Transfer RNA biogenesis [BR:psiu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    116759009 (GARS1)
Mitochondrial biogenesis [BR:psiu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    116759009 (GARS1)
SSDB
Motif
Pfam: HGTP_anticodon tRNA-synt_2b WHEP-TRS DUF5915
Other DBs
NCBI-GeneID: 116759009
NCBI-ProteinID: XP_032498071
Ensembl: ENSPSNG00000011425
UniProt: A0A8C9C2M5
LinkDB
Position
9:complement(46275596..46316564)
AA seq 739 aa
MPSLRPALLRAARAALLLSPPHRLPARPPLLPCRPISKPARAPTSFPAAASRSSMDGAGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDVVD
RGKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLDNYGQQELGDLFVNYNVKSPTTGNDLSPPVPFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLVKV
GVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL
VAEKPLKEPKTVNVVQFEPNKGAIGKAYKKDAKLVMEYLAICDECYITEMEKLLNEKGEF
TIETEGKTFQLTKDMVIVKRFQKTLHVEEVVPSVIEPSFGLGRIMYTVFEHTFQIREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGISHKVDDSSGSIGRRYAR
TDEIGVAFGITIDFDTVNKAPHTATLRDRDSMRQIRAEVSDLPSVVRDLANGSITWADVE
ARYPLFEGQETGKKETIEE
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgccctctctgcgcccggcgctgcttagagccgcccgcgccgctctgctgctgtcgccg
ccgcaccggctcccggcccggcctcctcttctgccctgccggcccatcagcaagccagcc
cgcgccccgacctcgttccccgctgccgcctcccggagcagcatggatggtgcgggggct
gaggaggtgctggcacctctcaggctagcggtgcgccagcagggagatcttgtgcgaaaa
ctgaaagaagataaagcaccccaggtcgatgtagacaaagcagtagctgagctcaaagcc
cggaagagggttctggaagcaaaggagctagcgttacagcccaaagatgatgttgtagac
agagggaaaatggaagataccctgaagaggaggtttttctacgatcaagcttttgctatt
tatggaggtgttagcggtctctatgattttgggccagttggatgtgctttgaaaaacaat
attattcagacatggagacagcacttcatccaagaggaacagattctggagattgattgc
accatgctcacccctgagccagttctaaagacttctggccatgtagacaaatttgctgac
ttcatggtgaaagatgtaaaaaatggagagtgttttcgtgctgaccatctattgaaagct
catttacagaaattgatgtctgataagaagtgttctgctgagaagaaatcagagatggaa
agtgtcttggcccagcttgataactatggacagcaagaactgggggatctttttgtgaac
tataatgtaaaatcccccactactggaaatgatctttcccctccagtgccttttaactta
atgttcaagaccttcattgggcctggaggaaacatgcctggatacttgagaccagaaact
gcacaggggattttcctgaatttcaaacgacttttggaattcaaccaaggaaagttgcct
tttgctgcggcccagattggaaattctttcagaaatgagatctcccctcgatctggactg
atccgagtcagagaattcacaatggcagaaattgagcactttgtagatcccagtgagaaa
gaccatcccaagttccagaatgtggcagacctccacctgtatttgtattcagcgaaagcc
caggtcagcgggcagtctgctcggaaaatgcgcctaggagatgctgttgaacagggcgtg
attaacaactcagtattaggctatttcattggccgcatctacctctacctcgtgaaggtt
ggtgtatctccagataagctccgcttccgacagcacatggagaatgagatggcccattat
gcctgtgactgttgggatgccgaatccaaaacatcctacggctggattgagattgtcggt
tgtgctgaccgttcctgttatgacctttcttgtcatgcgagagccaccaaagtcccactc
gtagctgagaagcctctgaaagagcccaaaacagtcaatgttgttcagtttgaacctaat
aagggagcaattggcaaggcatataagaaggatgcaaagctggtgatggagtaccttgcc
atttgtgatgagtgttacattacagaaatggagaaactactgaatgaaaaaggggaattt
actattgaaactgaagggaaaacatttcagttgacaaaagacatggtcattgtgaagagg
ttccagaaaacactacatgtggaagaagttgttccgagtgtaattgaaccctcatttggc
ctgggtaggatcatgtatacagtatttgaacatacattccaaatacgcgagggagatgaa
cagagaacgttcttcagtttccctgctgtagtagctccattcaaatgttccgtccttcca
ctgagccaaaaccaggagttcatgccgtttgtcaaggaattatcggaagccttgacccgg
cacggcatctctcacaaagtagacgattcctcggggtccatcggaagacgctacgccagg
actgatgagatcggcgtggctttcggcatcaccattgactttgatacagtgaacaaggcc
cctcacacggcaaccctgcgggaccgagactccatgcggcagataagagcagaggtctct
gatctgcccagcgtagttcgcgatctggccaatggcagcatcacgtgggctgatgtggag
gccagatatcctctctttgaaggtcaggaaactgggaaaaaagagacaatcgaagaatga

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