Phocoena sinus (vaquita): 116759049
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Entry
116759049 CDS
T07759
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04613
Neutrophil extracellular trap formation
psiu05034
Alcoholism
psiu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
116759049 (HDAC9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116759049 (HDAC9)
09165 Substance dependence
05034 Alcoholism
116759049 (HDAC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116759049 (HDAC9)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116759049 (HDAC9)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
116759049 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
116759049
NCBI-ProteinID:
XP_032498196
Ensembl:
ENSPSNG00000009029
LinkDB
All DBs
Position
9:71508176..72333248
Genome browser
AA seq
986 aa
AA seq
DB search
MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVER
HRREQQLPPLRGKDRGRESKRHQGAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRH
PKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQ
KVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGNVTENETS
VLPPTPQAEKMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPAQLNASNSLKEKQK
CETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQQKLLVA
GGVPLHPQSPLATKERISPGVRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLE
KQKQYQQQIHMNKQPFLELQHARALSVRPAQLAADGMDGLEKHRLVSRTHSSPAACILPH
PAMDCHLLPGSATGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERI
QGRKASLEEIQLVHSEHHSLLYGTNPLDGQKLDPRTLLGDSSQKFFSSLPCGGLGVDSDT
IWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAI
TAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEV
GTGLGEGYNINIAWTGGLDPPMGDTEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHA
PPLGGYKVTAKCFGHLTKQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPL
AEDILQQTPNMNAVISLQKIIEIQSKYWKSVRTVSVPRGCALAGAQLQEETETVSALASL
TVDVEQPFAREDNRTAGEPMEEEPAL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtatgatcagctcagttgatgtaaaatcagaggttcctgtgggcctggagccc
atctcgcctttagacctaaggacagacctcaggatgatgatgcccgtggtggaccctgta
gtccgtgagaagcaacttcagcaggagttactcctcatccagcaacagcagcaaatccag
aagcagctcttgatcgcagagtttcagaaacagcatgagaacttgacacggcagcaccag
gctcagcttcaggagcacatcaagttgcaacaggaacttctagccataaaacagcaacaa
gaactgctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagagagg
catcgcagagaacagcagcttcctcctctcagaggcaaagatagaggacgagaaagtaag
aggcaccagggggcagtggcaagtacagaagtaaagcagaagcttcaagaattcctgttg
agtaaatcagcaacaaaagacactccaactaatggaaaaaatcattccgtgagccgccat
cccaagctctggtacacggctgcccaccacacgtcattggatcaaagctctccacccctg
agtggaacgtctccatcctacaaatacacattaccaggagcacaagatgcaaaggacgat
ttccctcttcgaaaaactgcctctgagcccaacttgaaggtgcggtccaggttaaaacag
aaagtggcagagaggagaagcagccccttactcaggcggaaggatggaaatgttgtcact
tcattcaagaagcgaatgtttgaggtgacagaatcctcagtcagtagcagttctccaggg
tctggtcccagttcaccaaacaatgggccaactggtaatgttactgaaaatgagacttcg
gttttgccccctactcctcaggctgagaaaatggtttcacagcaacgcattctaattcac
gaagattccatgaacctgctcagtctttatacctctccctctttgcccaacattaccctg
ggacttccagcagtgccagcccagctgaatgcttcaaattcgctcaaagaaaaacagaag
tgtgagacccagacactcaggcaaggcgttcctctgcctgggcagtatgggggcagcatc
ccggcatcttcaagccatccccatgtcactttggagggaaagcccaacagcagccaccaa
gctctcctgcagcatttattattgaaagaacagatgcgacagcaaaagcttctcgtggct
ggtggagttcccttacatcctcagtctcccttggcaacgaaagagagaatttcacctggc
gttagaggtacccacaaattaccccgtcacagacccttgaatcgaacccagtctgcacct
ttgcctcagagcacattggctcagctggtcattcagcagcaacaccagcaattcttggag
aagcagaagcaataccagcagcagatccacatgaacaagcagcccttcctggagctgcag
cacgcacgtgcgctttcggtgcgcccagctcaactggctgcggatggcatggacggatta
gagaaacatcgtcttgtctccaggactcattcctcccctgctgcctgcattttacctcac
ccagcaatggactgccacctcctgcctggctctgcaactggaattgcctatgatcctctg
atgctgaaacaccagtgcatttgtggcaattccaccacccaccctgagcacgctggacgc
atacagagcatctggtcacggctgcaagaaactgggttgctaaataaatgtgagcgaatt
caaggtcgaaaagccagcctggaggaaatacagcttgttcattctgaacatcactcactg
ttgtatggcaccaaccccctggatggacagaagctggaccccaggacactactaggtgac
tcttctcaaaagtttttttcttcattaccttgtggtggacttggggtggacagtgacacc
atttggaatgagctgcactcgtccggtgctgcacgcatggctgttggctgtgtcatcgag
ctggcttccaaagtggcctcaggagagctgaagaatggatttgctgttgtgaggccccca
ggccatcacgctgaagaatccacagccatggggttctgcttttttaattcagttgcaatt
accgccaaatacttgagagaccaactaaatataagcaagatattgattgtagatctggat
gttcaccatggaaatggtacacagcaggccttttatgctgaccccagcatcctgtatatt
tcactccatcgctatgatgaagggaactttttccctggcagtggagccccaaatgaggtt
ggaacaggccttggagaaggatacaatataaatattgcctggacaggtggccttgatccc
cccatgggagatactgagtaccttgaagcgttcaggactatagtgaagcctgtggccaaa
gagtttgatccagacatggtcctggtttctgctggatttgatgcattagaaggccacgcc
cctcctctggggggctacaaagtgacagcaaaatgctttggtcatttgacgaagcaattg
atgacactggctgatggacatgtggtgttggctctagaaggaggacatgatctcacagcc
atctgcgatgcatcagaagcctgtgtaaatgcccttctaggaaatgagctggagccactt
gcagaagatattctccaacaaactccgaatatgaatgctgttatttctttacagaagatc
attgaaattcaaagcaagtactggaagtcggtaaggacggtgagtgtgccgaggggctgc
gctctggctggggcgcagttgcaagaggagacggagaccgtttctgccctggcctccctg
acggtggatgtggaacagccctttgctcgagaagacaacagaactgctggcgagcctatg
gaagaggagccagccttgtga
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