Phocoena sinus (vaquita): 116759062
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Entry
116759062 CDS
T07759
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04020
Calcium signaling pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116759062 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116759062 (PTAFR)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
116759062 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
psiu04030
]
116759062 (PTAFR)
G protein-coupled receptors [BR:
psiu04030
]
Rhodopsin family
Others
Platelet activating factor
116759062 (PTAFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
Motif
Other DBs
NCBI-GeneID:
116759062
NCBI-ProteinID:
XP_032498252
Ensembl:
ENSPSNG00000006046
UniProt:
A0A8C9BC81
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Position
1:complement(22176077..22201100)
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AA seq
342 aa
AA seq
DB search
MEANDSSRVDSEFRYTLFPIFYSIIFVLGVLANSYVLWVFAHLYPSKKFNEIKIFMVNLT
MADLLFLVTLPLWIIYYYNEGNWILPEFLCNLAGCFFFINTYCSVAFLAVITYNRFQAVT
QPIKTVQVTTRKRGILLSLIIWVAIVAAASYYLILDSTNTVPNKTGSGNITRCFEHYEKG
RIPVLIIHVFLVFSFFLTFLIILVCNLVIIVTLLTQPMQMQHNAEIKCRALWMVCTVLAV
FIICFVPHHIVQLPWTLAELGFRNSSSHQAMNDAHQVTLCLLSTNCVLDPIIYCFLTKKF
RKHLTEKFYSMRSSRKCSRATMETGTEVVMPLKQVPVNSLKD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaatgattcctctcgtgtggattctgagttccgatacaccctcttcccaatt
ttttacagcatcatctttgtgttgggggtcctcgccaacagctatgtgctgtgggtcttt
gcccacctgtacccttccaagaaattcaatgagataaagatcttcatggtgaacctcacc
atggctgacctgctcttcctggtcaccctgcccctgtggatcatctactactacaacgag
ggcaactggattcttcctgaattcctgtgtaacctcgctggctgcttcttcttcattaac
acctactgctcagtggcctttttggccgtcatcacttataaccgcttccaggctgtcaca
cagcccatcaagacggttcaggtcaccacccgcaagcgtggcatccttttgtccctgatc
atctgggtggccattgtggccgctgcatcctactacctcatcctggactccaccaacaca
gtgcccaacaagacgggctcaggcaacatcacacgctgctttgagcattacgagaagggc
agaatcccagtcctcatcatccacgtcttcctcgtgttcagcttcttcctcaccttcctc
atcatcctcgtttgcaacctggtcatcatcgtcacgctgctcacgcagccgatgcagatg
cagcacaacgccgagatcaagtgccgggcgctctggatggtctgcacggtgctggctgtg
ttcatcatctgctttgtgccccaccacattgtacagctgccctggaccctggctgagctg
ggcttccggaacagcagctcccaccaggctatgaacgatgcacatcaggtcactctctgc
ctccttagtaccaactgtgtcttagaccccatcatctactgtttcctcaccaagaagttc
cgtaagcacctaacggagaagttctacagtatgcgcagcagccggaaatgctcccgggcc
accatggagacaggcaccgaagtggtcatgccgctcaaacaggtccctgtcaattccctc
aaagattag
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