Phocoena sinus (vaquita): 116759169
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Entry
116759169 CDS
T07759
Symbol
CDHR3
Name
(RefSeq) cadherin-related family member 3
KO
K16503
cadherin-related family member 3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116759169 (CDHR3)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Cadherin related
116759169 (CDHR3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
116759169
NCBI-ProteinID:
XP_032498475
Ensembl:
ENSPSNG00000022590
LinkDB
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Position
9:89403412..89474897
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AA seq
873 aa
AA seq
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MQEAILFLLLLGALSVGHALHLIHLPATSNVAENSPPETSVHKFSVTLSASLSPVTPGFP
LINSSPLTEAFRVNWLSDTDFEVVTTGKEQLDFETGPRIFDLQICVKDDVGVTDLQVLTV
QVTDVNEPPEFQGNLATGLDLYIVEGAKPGFIYQVEAFDPEDTRQNIPLGYFLISPSKSF
RMSANGTLFSTTEFDFEAGHSRYHLIVEVRDSQGLRASMELQVNIVNINDEIPRFTSPTH
VYTIPEELGPGAIVANITAEDPDDKGFTSFLFYSITTVNSYFMINQLTGTIQVVRRIDRD
AGELRQNPAISLEVLVKDRPSGGQENRKQITFIVEDINDNPSTCTKFTFSIMVPERAAKG
TLLLDLSKFCFDDDSEAPNNQFNFTTPSGVGSGSRFLQDPAGSGTIVLIGDLDYENSSNL
AAGNKYTVIIQVQDVAPPYYKNNIYIYILTSPENEFPLVFDSPSYVFAVSELSPSRTRVG
RMQATDKDFPQRGIVYSISTGGASQHYPNIFWINPQTGELQLVTKADYETTPFFILRIQA
TNGEDSSLVTVTVNIIEENDEKPICTPNSYFLAIPVDLKIGTNIYNFKLTCTDLDSSPRS
FRYSIGSGNINSHFTFSPNAGSNVTSLILATRFDYASGLDKIWNYKLLVYITDDNLLSDR
KRAAALVETGTVTLSISVIPHPTTTVTTTPRPRITYRILRKNMYSPSAWYVPFVITLGSM
LLLGLLVSLIVLLAKAIHRHCPCKTGKHKKPLVKKETIQMNTVFDGEAADPVTGAIYEFN
TKTGARKWKDGTLTQMPKWKESSPQGAAPRRPVTGEGAGPLRSTHKEGDGLRDKAQAKNT
VPWSRNQDSKPSTPKNRNSALTGGGSPKPHPEK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggccatcctcttcctgcttctcctgggcgccctgtcagtgggacatgcacta
cacctaatccacttacctgctacaagcaacgtggcagagaattctccacctgagacttca
gtgcacaagttttctgtgacattatccgcatcactgtcacctgtgaccccagggtttccc
ctaatcaactcaagtcctctcactgaggccttcagggtgaactggctgtcagacactgac
tttgaggttgtcaccaccgggaaggaacaactagattttgaaacaggaccacgcatattt
gatttgcagatttgtgtgaaggatgacgtgggtgtcactgacctgcaggtcctgacggtc
caggtaacagatgtgaatgagccgcctgagtttcaaggcaacttggcaacaggtctagac
ctctacatagtggaaggagcaaagcctggattcatttaccaggtggaggccttcgatcca
gaagacacaaggcaaaacatacccctcggttatttcctgatttccccttcaaagagtttc
agaatgtctgctaatgggaccctcttctccacgacagaatttgactttgaagcaggacac
agcaggtaccatctcatcgtggaagtgagagatagccaagggctcagagcctccatggag
ctgcaggtgaacatcgtgaatatcaatgatgagatccctcgctttaccagcccaacgcac
gtgtacacgattcccgaggagctgggtccaggagcaattgtggccaatatcacagctgag
gaccctgatgataaaggttttaccagcttcctcttctacagcatcactactgtcaacagc
tatttcatgatcaatcagttgactgggaccatccaagtggtgcgcaggatagaccgagat
gcaggtgaattaagacaaaatcccgccatatctctggaggttctggtgaaggatagaccc
tctgggggtcaggagaatcgcaagcagataaccttcattgtggaagacattaatgacaac
ccctcgacatgcaccaagttcaccttcagcattatggtgcctgagagagcagccaagggg
acgttgcttctggacctgagcaagttctgctttgatgatgacagcgaagcaccaaacaac
caattcaacttcaccacgccatccggagtggggagcggcagcagatttttacaggatcca
gctggctctgggacaatcgtgttgattggtgatctagattatgaaaattcaagtaatcta
gcagccggcaataaatacactgtgataatccaggtgcaggatgttgcccctccttactat
aaaaataatatctacatttatatcctaacaagcccagaaaatgagtttcctcttgtcttt
gatagcccatcctacgtatttgccgtgtcagaattaagcccatctagaacccgggttgga
cggatgcaagcaacagataaagacttcccccagagaggcatcgtgtactccatctccact
ggaggggccagccagcactacccaaacatattttggattaatccccaaacgggagaactc
cagctggtgactaaagcggactacgagacaacccccttctttattctcagaatccaggcc
accaacggcgaggacagcagcttagtcactgtgactgtgaacatcattgaagaaaatgat
gaaaaaccaatctgtaccccaaactcgtacttcctggccatcccagtggatctgaaaatt
ggcacaaatatttacaatttcaagctcacgtgtactgaccttgattccagccccaggtct
tttcgttactccattggctcagggaacatcaacagtcatttcaccttctctcccaacgcc
gggtccaacgttacaagcctgatcctcgcgactcgctttgactatgctagtgggcttgat
aagatctggaactacaaactacttgtctacataactgatgacaacttgctgtccgacagg
aagagagctgcagctcttgttgaaacaggcacagtgaccctgagcattagtgtcattcct
cacccaaccacgactgtcaccacaacccccaggcccaggatcacctaccggatcctgagg
aagaacatgtattctccatcggcctggtatgtgccttttgtcatcactttgggctccatg
ctgcttctgggtctcctggtgtccctgatcgtcctgttggccaaagccatccacagacac
tgtccctgcaagactgggaagcacaagaaacctctggtgaagaaagaaacaatccagatg
aacactgtctttgatggagaagccgcagacccagttactggggcaatatatgaattcaac
acaaaaactggagccagaaagtggaaagatgggaccttaacccaaatgccaaaatggaag
gagtccagccctcagggagctgctccaagaagacctgtcactggggaaggggccgggcca
ctaaggagcacccacaaggaaggagatgggctgagagacaaagcacaggccaagaataca
gtcccatggtccaggaaccaggacagcaagccaagcaccccaaagaacagaaactcagcc
cttacgggtggggggtcccccaaaccgcacccagaaaagtga
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