Phocoena sinus (vaquita): 116759253
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Entry
116759253 CDS
T07759
Symbol
PUS7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116759253 (PUS7)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
116759253 (PUS7)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116759253 (PUS7)
Prokaryotic type
116759253 (PUS7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
116759253
NCBI-ProteinID:
XP_032498659
Ensembl:
ENSPSNG00000022579
LinkDB
All DBs
Position
9:complement(88962016..89069651)
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AA seq
720 aa
AA seq
DB search
MAVTLRGRLATSQFGAMEANSSREIEARNYLEKHRIMELLTYLTSALLFFRPGSLKFFLG
TLTMEMTEMTGVSLKRGSVAVEDNDSVAPGEAKRQKVSECCPTKGQDGLENNSLPSGEKV
PGPPKTAGEGKKNSDPQSEEEGEEDGLSEEGEEEEEAESFASMMKHGLTELDVGITKFVS
SHQGFSGILKERYSDFVVHEIGKNGQISHLSDLSVPVDEEDPSEDVFTVLTAEEKQRLEE
LQLFKNKETSVAIEVIEDTKEKRTVIHQAIKSLFPGLETKTEDREGKKYIVAYHAAGKKA
LANPRKHSWPKSRGSYCHFLLYKENKDTMDAINLLSKYLRVKPNIFSYMGTKDKRAITVQ
EIAVLKITAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNITGTDDQVEQ
AMNSLKEIGFINYYGMQRFGTTAVPTYQVGRAILQNSWAEVMDLILKPRSGAEKGYLVKC
REEWAKTKDPAAALRKLPVKRCVEGQLLRGLSKYGLKNIVSAFGIIPRNNRLMYIHSYQS
YVWNNMVSKRIEEYGLNPVPGDLVLKGAAVVCIEEDDVNNYSIHDVVMPLPGFDVIYPQH
KISEAYREMLTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNT
DVDNLEGKPPPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgacgctgcgtggtcgcctagcaacgtcccaattcggagcgatggaggccaac
agcagcagggagatcgaagccaggaattatttggaaaaacatcggattatggagttgctg
acctatctcaccagcgccctcctctttttccggccgggttctcttaaattctttcttgga
accttgacaatggagatgacagaaatgacgggtgtgtcattgaaacgggggtctgttgcc
gtcgaagataatgacagtgtggccccaggtgaggcaaagagacagaaggtctcagaatgc
tgtccgaccaaaggtcaagacgggctagagaacaactctctacccagcggtgaaaaggtg
cctgggccacccaaaacggccggagagggtaaaaagaattctgacccccagtcggaggag
gagggggaggaagatggcctttcagaggagggggaggaggaggaagaggcagagagcttc
gccagcatgatgaagcacgggctcaccgagctggatgtgggcatcaccaagttcgtgagt
tctcaccaaggattctcaggaatcttaaaagaaagatattctgacttcgttgttcacgaa
ataggaaaaaatggacagatcagccatttgagtgacttgtctgtcccagtagatgaagag
gatccttcagaagatgtatttacggttttaacagctgaagaaaagcagcgtttagaagag
ctccagctttttaaaaataaggaaaccagtgttgccatcgaggttattgaggacaccaaa
gagaaaagaaccgtcatccatcaagcgattaaatctctgtttccaggattagaaacaaaa
acagaagatagagaggggaagaaatatattgtagcctatcatgcagctggaaaaaaggct
ctggcaaatccaagaaaacattcttggccaaaatctaggggaagttactgccacttttta
ctgtacaaggaaaacaaagacaccatggatgctattaatctactgtctaaatatttaaga
gtcaagccaaacatattctcctacatgggaaccaaagataaaagggccataaccgttcaa
gagattgctgttctcaaaataactgcacaaagacttgcccacttgaataagtgcttgatg
aactttaagctagggaatttcagctatcagaaaaaccctctgaaattgggagagcttcaa
gggaatcacttcactgttgtcctcagaaatattactggaactgatgaccaagtggaacaa
gccatgaactctctcaaggagattggatttattaactactatggaatgcaaaggtttgga
accacagccgtccccacatatcaagttggaagagctatactacaaaattcctgggctgaa
gtcatggatttaatattgaaaccccgttctggagctgaaaaggggtacttggttaaatgc
agggaggaatgggcgaagaccaaagacccagccgctgccctccgaaaactacctgtcaaa
aggtgtgtggaagggcagcttctccgaggactttcaaaatacggactgaagaatatagtc
tctgcatttggcataataccaagaaataatcgcttaatgtatattcatagctatcagagc
tatgtgtggaacaacatggtgagcaagaggattgaagagtatggactgaaccctgtcccg
ggggaccttgttctcaaaggagctgcagttgtctgtattgaggaagacgatgttaataat
tactccatccatgatgtggtaatgcccttgcctggttttgatgttatctacccccagcat
aaaattagtgaagcctacagggaaatgctcacagcggacaatcttgatattgacaacatg
agacacaaaattagagattattccttatcaggggcctaccgaaagatcattattcgtccg
cagaatgtcagctgggaagtcgttgcatatgatgatcctaaaattccactcttcaacaca
gatgtggacaacctagaagggaaaccaccaccagtgtttgcttctgaaggcaaatacaga
gctctgaagatggatttttctctccctccttctacctacgcgaccatggccattcgcgaa
gtgctaaaaatggataccagcataaagaaccagacccagctgaataccacctggctccgc
tga
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