Phocoena sinus (vaquita): 116759290
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Entry
116759290 CDS
T07759
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116759290 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116759290 (SNX13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Swi3
Motif
Other DBs
NCBI-GeneID:
116759290
NCBI-ProteinID:
XP_032498756
Ensembl:
ENSPSNG00000008877
UniProt:
A0A8C9E226
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Position
9:complement(71042110..71183951)
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AA seq
968 aa
AA seq
DB search
MLTETSLSIWGWGSLGIVLSLITFGPFVIFYLAFYILCFVGGGFVVTLLFGKTNSEKDLE
QCEHSFLPPTSTGIPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKIT
EKDDQVKGTAEDLVDTFFEVEVEMEKDVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGILLPLINQLSDPDYINQYIIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTV
KLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
SSRQKDGRHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPT
GSINLSLDDLSNVSSDDSVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRS
LNSEEMWKTYRRYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNAY
LQLLLTPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
LPDSFAEGMTKMSDNMGKMSERLGQDIRQSFFKVPPLIPKTDSDPEHCRVSAQLDDTVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADLVKRFRDAFWPNGILAETVPCRDKAIRMRTRVAGKTKLLSIMPDELKHIIGAETTRK
GILRVFEMFQHNQLNRRMVYVFLEGFLESLFPQYKFRELFNRLHSRSKQMQKYKQKLHTT
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagagaccagtctgtccatatggggatggggaagccttggcattgtcctttct
ctaataacgtttggaccctttgtaatattttatttggcattttatatcctctgctttgtg
ggtgggggttttgtggttactctcctctttggaaaaacaaactcagagaaggacctagag
cagtgtgaacactcatttcttcctccaacatcaactgggattcctaagtgcttagaagaa
atgaaacgggaagccaggactataaagatcgatagaagattgacaggtgccaatataatt
gatgaacctctccagcaagttatccaattttccttgagggattatgtccagtattggtat
tatacactaagtgatgatgaatcttttcttcttgaaattaggcagactcttcagaatgca
ctcattcagtttgctactaggtcaaaagaaatagactggcaaccttattttactacacgc
attgtagatgattttggcacacacctacgagtattcagaaaggctcaacagaagataaca
gagaaagatgatcaagtaaaaggtacagcagaagatcttgtagataccttctttgaagtt
gaagttgaaatggagaaggacgtttgccgtgacctagtgtgcacatctcccaaagatgaa
gaaggattcctaagggatttgtgtgaggtcttattatatttattgctacctcctggagat
ttccagaacaagatcatgcgatactttgtcagggaaatccttgcacgaggaattcttctt
ccattaataaatcaactcagtgatcctgattatattaatcaatatatcatatggatgatc
cgtgattctaactgcaactatgaggcctttatgaacattattaaattgagtgacaatatt
ggagagctagaagcagtccgagataaagcagcagaagaattacaatatcttcgatctcta
gatacagctggtgatgatatcaacaccatcaaaaatcaaataaatagcttattatttgta
aagaaagtatgtgactcaagaatacaacggttgcagtcaggcaaggaaataaatactgtg
aaactggcagcaaactttgggaaactttgcacagtccccctggacagcattcttgtagac
aatgttgcactacaattttttatggattacatgcagcaaactggaggtcaggcacatctc
ttcttttggatgacagtggaaggataccgggttacagcccaacaacagctagaagtttta
tcaagtcgtcagaaagatggaagacatcaaaccaaccaaaccaaaggtcttttaagagca
gctgctgttggaatttatgaacagtatttatcagaaaaggcatctccaagagttactgtt
gatgattatttggtagcaaaattagcagatactttgaatcatgaagatccaacacctgaa
atctttgatgacattcaaaggaaggtatatgaattgatgctacgagatgaaagattttat
ccttccttcaggcagaatgcactttatgtgcgcatgttagctgagctggatatgttaaaa
gatcctagtttcagaggatcagatgatggtgatggagaatcttttaatgggtctcctaca
ggaagcataaatttgtctttagatgacctttcaaatgtatcttctgatgactcagtacaa
cttcatgcttacatttcagacactgtatatgctgactatgacccatatgctgtggcaggc
gtttgtaatgatcatggcaagacatacgcattatatgccatcactgtacaccggcgcagt
ctaaacagtgaggagatgtggaaaacctaccgtcgttatagtgacttccacgacttccac
atgaggatcaccgaacagtttgaaaatctgtcaagcatattaaagcttcccggtaaaaag
acttttaataatatggatagagattttttagaaaagagaaaaaaggatctaaatgcatat
ttgcagttactgttaactcctgaaatgatgaaagcatccccggctttggctcactatgtg
tatgatttccttgagaacaaagcctacagtaaagggaaaggggattttgctcgtaagatg
gacacttttgtaaatccgcttcgaaattctatgaggaatgtttcaaatgcagttaaatcc
cttcctgatagcttcgcagagggaatgactaaaatgtcagacaacatgggcaaaatgtca
gagagattaggtcaagacataaggcaatcatttttcaaggttcctcctttaattccaaag
actgattcagatcctgaacattgtcgagtttcagctcaacttgatgatactgtggatgac
aatattccacttcgggtaatgctgcttctcatggatgaagtattcgacttaaaagagaga
aatcagtggttgcgaaggaatatcaaaaacctacttcaacagcttattagagccacatat
ggtgatactattaatagaaaaatagttgaccatgttgactggatgacctcacctgagcaa
gtagccgacttagtgaaacgtttcagagatgccttttggccaaatggcattttagcagag
actgttccatgcagagataaagctattcgaatgagaacaagagttgcaggaaaaactaaa
ttactttcaattatgccagatgaactgaagcacattattggggctgagacaacacggaaa
ggtattcttcgtgtatttgaaatgtttcagcacaaccagttaaataggaggatggtttat
gtctttttggaaggctttttggaaagcttatttccacagtataaattccgtgaacttttc
aacagactgcattcacggtcaaagcagatgcagaaatataaacagaaacttcatactact
caagcgccttctttacagaaaaggtga
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