Phocoena sinus (vaquita): 116759317
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Entry
116759317 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-1-like
KO
K03347
cullin 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04110
Cell cycle
psiu04114
Oocyte meiosis
psiu04120
Ubiquitin mediated proteolysis
psiu04141
Protein processing in endoplasmic reticulum
psiu04310
Wnt signaling pathway
psiu04340
Hedgehog signaling pathway
psiu04350
TGF-beta signaling pathway
psiu04710
Circadian rhythm
psiu05170
Human immunodeficiency virus 1 infection
psiu05200
Pathways in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116759317
04120 Ubiquitin mediated proteolysis
116759317
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116759317
04350 TGF-beta signaling pathway
116759317
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
116759317
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116759317
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
116759317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116759317
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
116759317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF4980
IntS11_C
Motif
Other DBs
NCBI-GeneID:
116759317
NCBI-ProteinID:
XP_032498823
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All DBs
Position
9:83838662..83841157
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AA seq
775 aa
AA seq
DB search
MSSNRSQNPHGLKQIGPDQTWDDLRAGIQQVYTRQSMVKSRYMELYTHVYNYCTSVHQSN
QAQEAGVPPSKSKKGETLEGVQLVGLELYKQLKEFLKNYLTNLLQDGEDLLDESVLKFYT
QQWEDYRFSSEVLNGICAYLNRYWVLCKYYGGRKGIYEIYSLALVTRRHCLFRPLNKQVT
NAVLKLIEKERNGETINTRLMSGVVQSYVELGLNEDDAFAMGPRLKVYKASFESQFLADT
ERFYTRESTKFLQQHXITEYMKKAETRLLEEQRRGQYLHENTQEELARKCRQVLTEKHLE
IFHREFHNLLDADKSEDLGHVYNLVSRIQDGLGELKTLLETHIHNQCIAAIEKWGEAALN
DPKMYIQTVLDVHKKYNALVMLAFNNNAGFVAALDKACGRFINNNAVTKMAQSSSKYSEL
LAGYCDFLLKKRSKNPEEAELEDTLNQVIAAFKYIEDKDMFQKFXAKMLAKRLVHQNSAS
DDAEASMISXLKQACGFEYTSKLQRMFQDIGTSKYLNEQFKKHPPNSEPLGLDFSIQVLS
SGSWPSQQSGTFALPSELERSYQRLTAFYASRHSGRKLTWLYQLSEGELVTNCFKNRYTL
QASTFQMAILLRYNTEDAYAAQQLMDSTQIKTDIFAQVLQILLKLKLLVLEDENTHVDEM
ELKQDTLIKLYLGYRNKKLRVNINVPMKMEQKQEQETTHRNIEADRKLLVQAALVRIMKM
RKVLKHQQLLGEVLTQLSSIFKPRIPVIKKCIDILIAKEYLERVDGEQDTYSYLA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaacaggagccagaatccccatggactgaagcagattggccctgaccagacc
tgggatgacctcagagctggaatccagcaagtgtataccagacaaagtatggtgaaatcc
agatacatggaactctacactcatgtttataactactgcacaagtgtgcaccagtcaaac
caagctcaagaggctggcgtccctccttctaaatcaaaaaagggggagacgctggaggga
gttcagttagttggcttggaactgtacaaacagcttaaagaatttttgaagaattacttg
acaaatcttcttcaggacggagaagatttgctagatgagagtgtactgaagttctacact
caacaatgggaagattaccggttttcaagtgaagtgctgaatgggatttgtgcctacctc
aatagatattgggttctctgcaaatattatggaggacgaaaaggaatctacgaaatctat
tctcttgccttggtgactaggagacattgtcttttcaggccattgaataaacaggtaaca
aatgctgttttaaaactgattgaaaaggaaagaaatggtgaaaccatcaatacaagactg
atgagtggagttgtacaatcttacgtggaactggggctgaacgaagacgatgcctttgcg
atgggccctaggctaaaggtgtacaaagcatcctttgagtctcagtttttggctgacaca
gagagattttataccagagagagtaccaaattcctgcaacagcacnncattactgagtat
atgaaaaaggcagagactcgtctgctggaggagcagcggagaggccagtaccttcatgag
aacacccaagaagagctagccaggaagtgcaggcaggtgctcactgagaaacacttggag
atcttccacagggaatttcacaatttactggatgccgacaaaagtgaagatttgggtcac
gtgtataatcttgtatctagaatccaggatggcctgggagaattgaaaacactcctggag
acacacattcataatcagtgtattgcggcaattgaaaagtggggagaagctgctttaaat
gaccccaaaatgtatatacagacagtgttggatgttcataaaaaatacaacgccctggtg
atgttggcattcaacaacaatgctggcttcgtggctgcgctggacaaggcttgcggtcgc
ttcataaacaacaatgcagttaccaaaatggctcagtcgtccagtaaatattccgagttg
ctggctggatactgtgacttcttgttgaagaagaggtccaagaacccagaagaagcagaa
ctagaagacacgctcaaccaagtgatagcggccttcaagtatatagaggacaaggacatg
tttcagaagttctaggcaaagatgctggcaaaaaggcttgttcatcagaacagtgcgagt
gatgacgccgaagcaagcatgatctccnagttaaagcaagcttgtggttttgagtatacc
tctaaacttcagcggatgtttcaagacattggtacaagcaaatatttgaatgagcagttc
aaaaagcacccgccaaattcagagccgctgggcttggatttcagtattcaagttctgagc
tccggatcatggccttctcagcagtccggtacgtttgccttgccttcggagctggaacgg
agttatcagcgcttgacggcgttttacgccagccgtcacagtggcagaaaattgacgtgg
ttatatcaactgtctgaaggagaattagtaacaaactgcttcaaaaacagatacaccttg
caggcatctacattccagatggccatcctgctccggtacaacacggaagacgcttacgcc
gcgcagcagctgatggacagcacccagatcaaaactgacatttttgcacaagtgctacag
atcttattgaagttgaagttactggtcttggaagatgaaaatacacatgttgatgagatg
gaattgaagcaagataccttaataaaattatatcttggttatagaaacaagaaattgagg
gttaacatcaatgtgccaatgaaaatggaacagaagcaggaacaagaaaccacacaccga
aacatcgaggcagatcgtaaactcttggtccaggcggctctcgtgagaattatgaaaatg
aggaaggttctaaaacaccagcagttacttggagaagtactgactcagctctcctcaata
ttcaagcctcggatcccagtaattaagaaatgcattgacattctaatcgcgaaagaatat
ttggaacgagtggatggtgaacaggacacctacagttacttggcgtaa
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