Phocoena sinus (vaquita): 116759352
Help
Entry
116759352 CDS
T07759
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116759352 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116759352 (PEX1)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
116759352 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
AAA_5
AAA_33
AAA_22
TIP49
ABC_tran
Sigma54_activ_2
AAA_28
DUF815
AAA_18
AAA_7
AAA_29
NPHP3_N
RNA_helicase
AAA_19
IstB_IS21
Mg_chelatase
AAA_2
Parvo_NS1
CoaE
APS_kinase
ORC-CDC6-like
T2SSE
AAA_10
Vps4_C
Motif
Other DBs
NCBI-GeneID:
116759352
NCBI-ProteinID:
XP_032498909
Ensembl:
ENSPSNG00000004442
LinkDB
All DBs
Position
9:complement(56507230..56579544)
Genome browser
AA seq
1283 aa
AA seq
DB search
MMWGGGRLAGAGGDGAVVTVAFTNARDCFLHLSRRLVAQLHLLQNQAIEVSWGHEPAFLS
WVEGRHFSDQGENVAEISRQFGQKLGLSNGEQVFLKPCSHVVSCQQVEVEPLSADDWEIL
ELHAASLEQNLLDQIRIVFPNAIFSVWVDQQAYIFIRIVALIPAAPYGRLETDSKLLIQP
KTHEAKENTFSKADNAHGKFHNFGEDQKGLTRELQTKQLQSNTVGVTGSKETDSEDTIDS
SLIPSLWTVIGSIFSFGSEKKQDTSWGLTEINAFKNMQSKVVPLDNIFRVCKSQPPSICN
ASATSLFHKHYTIHVFPWDQEYFDVEPSFTVTYGKLVKLLSPKQQQSKMKQNVLSPEKEK
QMSEPLDQKQSSPDHSQEGGNACVLKVVWNGLEELENAIKYTKNLEALHLGKVWIPDDLR
KRLNIEMHAVVRITPVEITPKIPRFLKLQPRENLLKDISEEDIKTVFYSWLQQSTTTTLP
LIVSEEEYIKLEMKDGLKEFSLNIVHSWEKEKEETLFLLSTNLLQKMTIQVLLDPMVKEE
NSEEIDFILPFLKLNCLGGVNSLGVSSVEHITHSLLGRPLSRQLMALVAGLRNGALLLTG
GKGSGKSTLAKAVCKEAFNLLDAHVEIVDCKALRGKRLENIQKALEAAFSEAVWRQPSVV
LLDDLDLVAGLPALPEHEHSPEAVQSRRLAHALNDVVKELISMGSLVALIATSQSQHSLH
PLLVSAQGVHIFQCVQHIQPPDQDQRCEILYNVIKNKLDCDMNKFTDLDLQCIAKETEGF
VARDFTVLMDRAIHSCLSHQSISTREELVLTTLDLRKALRGFIPVSLRNVDLHNPRDLGW
DKIGGLHEVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESG
MNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDR
VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNV
LSDSLPLADDVDLQNVASVTNSFTGADLKALLYNAQLEALHGRLLSCGLQDGGSSSDSDL
SLSSMVFLNHSSGSDDSAGDGECGLEQSLVSLEMSEVLPDESKFNMYRLYFGSSYESELG
NGTSSDLSSQCLSAPSSMTRDFPGVPGKDQSSRPPVFRTASQEGYQELTQEQRDQLRADI
SIIKGRYQSQIGEDDALNQPGPIRTSLAISQSHLMTALSHTRPSISEDDWKNFAELYESF
QNPKKRKNQSGTVFRPGQKVTLA
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggggcggcggtcgcctggcaggtgcggggggtgacggggcggtcgtgaccgtg
gccttcaccaacgctcgcgactgcttcctccatttgtcgcggcgcctcgtggcccagctg
catctgctgcagaatcaagctatagaagtatcctggggtcacgagcctgcattcttgagc
tgggtggaaggcagacattttagtgatcaaggtgaaaatgtggctgaaattagcagacaa
tttggtcagaaacttggactttcaaatggggaacaggtgtttctcaagccttgttcccat
gtggtgtcttgtcaacaagttgaggtggaacccctctcagcagatgattgggagatactg
gagctgcatgctgcttcccttgaacagaatcttctagatcaaattcgaatagtttttcca
aacgccattttttctgtttgggttgatcagcaagcttacatatttatccggattgttgca
ctaataccagctgctccttatggaaggctggaaactgatagcaaactccttattcagcca
aagacccatgaagccaaagagaatacattttcaaaagcagataatgcacatggaaaattt
cataattttggagaagaccaaaaaggattgacaagagaacttcaaaccaagcaacttcaa
tcaaatactgtaggagtcactgggtcaaaagaaacagattcagaggatacaattgactca
tcattaataccaagcttatggactgtgataggaagcattttttcttttgggtctgagaag
aaacaagacacatcctgggggttaactgaaatcaatgcattcaaaaatatgcagtcaaaa
gttgttcctctggataatattttcagagtatgtaaatctcagcctcccagcatatgtaat
gcatcagcaacttctctgtttcacaaacattataccattcatgtatttccatgggaccag
gaatattttgatgtggagcccagctttactgtgacctatggaaagctagttaaactactt
tctccaaagcaacagcaaagtaaaatgaagcaaaatgtcctgtcacctgaaaaagagaag
cagatgtcagaaccactagatcaaaaacagagtagcccagaccatagtcaagaaggtggc
aatgcctgtgtgctaaaggtagtctggaatggacttgaggaattggagaatgccattaaa
tacaccaaaaacttggaagctcttcatcttgggaaagtttggatcccagatgacctgaga
aagaggctaaatatagaaatgcatgcagtagtcagaataactccagtggaaattacccct
aaaattccaagatttctaaaattacaacctagagaaaacttacttaaagacataagtgaa
gaagacataaaaactgtgttctattcatggctacagcagtctactactaccacacttcct
ctgatagtatcagaggaagaatatattaagttggaaatgaaagatgggttgaaggagttt
tctctgaatatagttcattcttgggaaaaggaaaaagaagaaactctttttctgttgagt
accaatctgctacagaagatgacaatacaagtccttctggatcctatggtaaaagaagaa
aacagtgaggagattgactttattcttccttttttaaagctgaactgcttgggaggagtg
aactccttaggcgtctcctccgtggagcacatcactcatagcctcctaggacgccctttg
tctcggcagctgatggcccttgtggcaggacttagaaacggagcccttttactcacggga
ggaaaggggagtggaaaatcaactttagcgaaggcagtctgtaaagaagcatttaactta
ttggatgcccatgtggaaatagttgactgtaaagctttacgaggaaaaaggcttgaaaac
atacagaaagccctagaggcagctttctcagaggcggtgtggcggcagccttctgttgtc
ctgttggatgacctggatctcgttgctggcctgcctgctcttccagaacacgagcacagt
cctgaggctgtgcagagccggaggctcgcacatgctttgaacgatgtggtgaaagagctt
atttccatgggaagtttggtggcactgattgctacaagccagtctcaacattctctacat
cctttacttgtttctgctcaaggagttcacatatttcagtgtgtccagcatattcaacct
cctgaccaggatcaaagatgtgaaattctgtataatgtaataaaaaataaactagactgt
gatatgaacaagttcactgatcttgatctgcagtgtatagcaaaagaaactgaagggttt
gtggctagagattttacagtgcttatggatcgagcgatacattcttgtctctctcatcag
agtatatccaccagggaagaattagttttaacaacattggacttgcgaaaggctctccga
ggatttattcctgtgtctctgcgaaatgtcgacctgcataaccctagggacctgggctgg
gataagattggaggattacatgaagttcgacagatacttgtggacactatccagttacca
gccaagtacccagaattatttgcaaacttgcccatacgacaaaggacaggagtgctgttg
tatggtcctcctggaacaggaaaaaccttactagctggagtaattgcacgagagagtgga
atgaattttattagtgtcaagggaccagagttactcagcaaatatattggagcaagtgaa
caagctgtacgggatatttttattagagcacaggctgcaaagccctgcatccttttcttt
gatgaatttgaatctattgcacctcgacgaggccacgataatacaggagttacagatcgt
gtagttaaccagttgctgactcagttggatggagtagaaggcttacagggtgtttatgta
ttggctgccactagtcgccctgacttgattgacccagccctgctcaggcctggccgacta
gataaatgtgtatactgtcctcctcctgatcaggtgtcacgtcttgaaattttaaacgtt
ctcagtgactctctacctctggcagatgatgtggaccttcagaacgtggcatcagtaacc
aactcctttacgggagctgatctgaaagctttactttacaatgcccagttagaggcctta
catggaaggctgctgtcttgtgggctgcaggatggaggttccagctctgatagtgacctg
agtctgtcttcaatggtttttcttaaccacagcagtggctctgatgattcagctggagat
ggagaatgtggcttagagcagtcccttgtttctctagagatgtctgaggtgcttccagat
gaatcaaaattcaatatgtaccggctctactttggaagctcttatgaatcagaacttgga
aacggaacctcttctgatttgagctcacaatgcctgtcagcaccaagctccatgactcgg
gattttcctggagttcctgggaaagatcagtcctcacgacccccagtcttcagaacagcc
tcacaagagggttatcaagagctcacacaggaacaaagagatcaactgcgggcagatatc
agtattatcaaaggcagataccaaagccaaattggagaggatgatgcccttaaccaacca
ggccccatcagaaccagtctggctattagtcagtcacatttaatgactgcgctcagtcac
acaaggccatccatcagtgaagatgactggaagaactttgctgagctgtatgaaagcttt
caaaatccaaagaagagaaaaaatcaaagtggaacagtgtttcgacctggacagaaagta
actctggcataa
DBGET
integrated database retrieval system
