Phocoena sinus (vaquita): 116759354
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Entry
116759354 CDS
T07759
Symbol
ABCB5
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family B member 5
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116759354 (ABCB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116759354 (ABCB5)
Transporters [BR:
psiu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116759354 (ABCB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_15
AAA_21
AAA_7
APS_kinase
DUF2207_C
Phage_holin_5_2
Motif
Other DBs
NCBI-GeneID:
116759354
NCBI-ProteinID:
XP_032498917
LinkDB
All DBs
Position
9:73767381..73876439
Genome browser
AA seq
1257 aa
AA seq
DB search
MANSERVEEMQENYQRNRKLQELPKVRQQVVGPIEKFRFADGLDITLMILGLLASLVNGA
CLPVMSLILGEMSDSLISGCLVKTNTTNYWNCTQSQEKVNEDMIVLILYYVGIGVTALVF
GYIQISFGVMTAARQTKRIQKQFFHSILSQDTSWFDSCGIGELNTRMTDDINKIIDGIGD
KIALLFQNMSTFSVGLAIGLVKGWKLILVTLSTSPLIIASAAMFSRIVISLSSKELNAYS
KAGAVAEVLSSLXTVIAFGAQEKEIQRYTQNLKDAKNVGMKKAIASKLSLGAVYFFMNGT
YGLAFWYGTSLILSGEPDYTIGTLLAVFISVIHSSYCIGAATPSFETFTIARGAAFNIFH
IIDKKTAIDKFSTTGYKLECIEGNVEFKNVSFSYPSRPSIKILKGLNLRIKSGETVALVG
LNSSGKSTAVQLLQRLYDPDDDFITVDGNDIRTLNVQHYREHFGVVSQEPVLFGTTINNN
IRYGRDGMTDEDIEKAAKEGNAYDFIMEFPMKFNTLVGEKGVQMSGGQKQRIAIARALVQ
YPKTLILDEATSALDTESESVVQATLEKARKCQTTIVVAHRLSTIRSVDMIVTIKDGMVV
EKGTHAELMAKQGLYYSLAMSQDIKKAGEQMNSMAYSTEKDISSIPLCSMNSIKSDFTDK
SEESIQNKETSLPEVSLXKIFXLNKSEWPSVVLGTLASVLNGTVHPVFSIIFAKIVTMFE
NDDKTTLKHDAEIYSMIFLILDIICFVSYFIQGLFYGRAGEILTMRLRHLAFKAMLYQDI
SWFDGKENSTGALTTILAIDTAQLQGATGSRVGVLTQNATNMGLSVIISFIYGWEMTLLI
LSIAPVLALTGMIEMAAMTGFANKDKQELKHAGKIATETVENIRTTVSLTREKAFGQMYE
ETLQTQHRNTLKKAQIIGICYSLSHAFLYFAYAACFRFGAYLIQAGRMTPEGMFRVFTAI
AYGAMTIGETLVLAPEYSRAKSGAAHLFALLEKKPTIDSYSQEWKKPDTYEGNIEFREXS
FFYPCLPDVLILHSLSLSIEKGKTVAFVGSSGCGKSISVQLLQRFYDPVKGQVLFDGVDA
KELNTVQWLCSQIAIISQEPVLFNCSIAENIAYGDNSCVVPLNEIKEVANAANIHSFIES
LPEKYNTQVGLKGTQLSGGQKQRLAIARALLQKPKILLLDEATSALDNESEKVVQHALDK
ASKGRTCLVVAHRLSTIQNADLIVVLHSGKIKEQGTHQELLRNRDIYFKLVNAQSVQ
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattctgaaagagttgaagaaatgcaagaaaattatcagagaaatagaaaactg
caagaactgcctaaagtaagacagcaagttgttggacctattgagaaatttcgctttgct
gatggactggacatcacactcatgatcctaggattactagcatcactagtaaatggggcc
tgtcttcctgtaatgtcactgattttaggagaaatgagtgacagccttatcagtggatgt
ctagtcaaaaccaacacaacaaattattggaactgtactcagtctcaagagaaggtgaat
gaagatatgattgtgttgatcctgtattatgttggaataggagttactgccttggttttt
ggctacatacagatttcctttggggttatgactgcagctcgacagaccaagagaattcaa
aaacagttttttcattcaattttgtctcaggacaccagctggtttgacagttgtggcatc
ggtgaacttaatactcgcatgactgatgacatcaacaaaatcattgatggtattggagac
aagattgctctgttgtttcaaaacatgtctaccttttctgttggcctggcgattggtttg
gtgaagggctggaaactcatcctggtgactctgtccacatcacctcttataattgcttca
gcagccatgttttctaggatagttatctcattgtccagtaaggaattaaatgcttattcc
aaagctggggctgtagcagaagtcttgtcatcactctgaacagtcatagcctttggggcc
caggaaaaagaaattcaaagatatactcagaatctaaaagatgcaaagaatgttggcatg
aaaaaagctatagcttcgaaactctctcttggtgctgtgtacttctttatgaatggaacc
tacggacttgctttttggtatggaacctccttgattcttagtggagaacctgattatacc
atcggaactctccttgctgtttttattagtgtaatccatagtagttattgcattggagca
gcaacccctagctttgaaaccttcactatagccagaggagccgcctttaatattttccac
attattgataagaaaactgctatagataagttttcaacaacaggctataaattggaatgc
atagaaggaaatgtggaatttaaaaatgtttctttcagttatccatcaagaccatctatc
aaaattctgaaaggtctgaatctcagaattaagtctggagagacagtagccttggttggc
ctcaacagcagtgggaagagtacagcagtccaacttttgcagaggttatatgatcctgat
gacgactttatcacggtggatggtaacgacatcagaactttaaatgtgcagcattatcga
gaacattttggagtggtcagccaagagcctgttttgtttgggaccaccattaataacaat
attagatatggacgagatggcatgactgatgaagacattgagaaagcagcaaaggaagga
aatgcttatgattttataatggagttccccatgaaatttaataccttggtaggggaaaaa
ggagttcaaatgagtggaggacagaaacagagaatcgcgattgctcgagctttagttcaa
tacccgaagaccctgatcttagatgaggctacctctgccctagatacagaaagcgaatca
gtggttcaagccacactggagaaggcaaggaaatgtcagactacaattgtggtagctcac
cggctttccactattcgaagtgtagatatgattgtgactataaaagatgggatggtggtg
gaaaaaggaacacatgctgaactaatggcaaaacagggtctatattattcacttgcaatg
tcacaggatattaaaaaagctggtgaacagatgaactcaatggcatattctactgaaaaa
gatatcagctcaattcctctgtgctctatgaatagcatcaagtcagactttactgacaag
tctgaggaatccatccaaaataaagagacaagtcttcctgaagtttctctttaaaaaatt
ttttaattaaacaagtctgaatggccttctgtggttctggggacattggcttctgttcta
aatggaactgttcatccagtattttccatcatctttgcaaaaattgtaactatgtttgaa
aatgatgataaaaccacattaaagcatgatgcagaaatttattccatgatatttttaatt
ttggatattatttgctttgtcagttatttcattcaaggattattttatggcagagcagga
gaaattttaaccatgagattaagacacttggcatttaaagccatgttatatcaggatatc
tcctggtttgatggtaaggaaaacagcacaggagccttgacaacaatattagccatagat
acagcacaacttcaaggagcaacaggttcaagggttggtgtcttaacacaaaatgcaaca
aacatgggactttcagttatcatttccttcatatatggatgggaaatgacactcttgatt
ctgagtattgctccagtacttgctctgacaggaatgattgaaatggcagcaatgactgga
tttgccaacaaggataagcaagaacttaagcatgctggaaagatagcaaccgaaactgtg
gagaatatacgcactacagtgtcattaacaagagaaaaagccttcgggcaaatgtatgag
gagacgcttcagactcagcacagaaataccttgaagaaagcacagatcattggaatctgt
tactcactcagccatgcctttttatattttgcctatgcagcgtgttttcgatttggagct
tatttaattcaagcaggacgaatgaccccagagggcatgttcagagtttttactgcaatt
gcatatggagctatgaccattggagaaacacttgttttggcacctgaatattcgagagcc
aaatctggggctgcacatctgtttgctttgttggaaaagaaaccaactatagacagctat
agtcaagaatggaaaaaacccgacacatatgaagggaatatagagttccgagagntctct
ttcttctatccatgcctcccagatgttctaatccttcacagtttatccctcagcattgag
aaagggaagactgtagcatttgttgggagcagtggctgtgggaaaagcatttctgtccaa
cttctgcagagattttatgacccagtgaaagggcaagtgctctttgatggtgtggatgca
aaggaattgaacacagtacagtggctttgttcccaaatagcaatcatttctcaagagcct
gtgctattcaactgtagcattgctgagaacattgcctatggtgataacagctgtgtcgtg
ccattgaatgagataaaagaagtagcaaatgcagcgaatatccactcttttattgagagt
ctccctgagaaatacaacacacaagttggactgaaaggaacacagctttctggtggccag
aaacaaagactagctattgcaagggctcttctccaaaaaccaaaaattttgttgttggat
gaggccacttcagcccttgataatgagagtgaaaaggtggttcagcatgcccttgataag
gccagtaaggggaggacatgcctagttgtggctcacagactctccacgatacagaatgca
gatctgatagtggttctgcacagtggaaaaataaaggaacaaggaactcatcaagagctc
ctgagaaatcgagacatatattttaaattagtaaatgcacagtcagtgcagtga
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