Phocoena sinus (vaquita): 116759356
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Entry
116759356 CDS
T07759
Name
(RefSeq) signaling lymphocytic activation molecule-like
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
psiu04517
IgSF CAM signaling
psiu05162
Measles
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116759356
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116759356
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
116759356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116759356
04090 CD molecules [BR:
psiu04090
]
116759356
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
SLAM/CD2 family
116759356
CD molecules [BR:
psiu04090
]
Proteins
116759356
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
ig
V-set
Motif
Other DBs
NCBI-GeneID:
116759356
NCBI-ProteinID:
XP_032498924
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All DBs
Position
1:116703292..116712984
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AA seq
256 aa
AA seq
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MGLNSELDFSISVLACLLASLALAFQVLLTAAARKALEVTGEGSTNCPVMILGRLGSSVL
LPPTSDGISKSMNKSIHILVTMAESPGDTTKKKIVSLDLRKGDSPRHLENGYEFHPENLS
LRILKSRKEDEGWYFMSLEENISVQHFCLQLKLYEQVSTPEIKVLNSSQENGNCSLMLAC
MVEKGDHVAYNWSEEAGAPLLSPTKNSHLLYLTLGPQDANNIYVCTVSNPISNGSQTFIP
WSRCSLGSSGECPCGG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaacagtgagctggacttttctatctctgtgctggcttgcctcctggccagt
ctggccctggcatttcaggttctgctgacagctgctgcacggaaagctttggaggtcact
ggtgagggctcaacgaattgcccagtgatgatccttgggcggctgggaagcagtgtgctg
ctgcccccgacatctgacgggataagtaagagcatgaataagagtattcacatccttgtc
acaatggcagaatcacccggagacaccaccaagaagaaaatagtgtctctggatctgcgg
aaaggtgactctccacgccatctggagaatggctatgagtttcatccagaaaacctgagc
ctgaggatcctgaaaagcaggaaggaggacgagggctggtactttatgagcctggaggaa
aacatttcagtccagcacttttgcctgcagctgaagctctatgagcaggtctccactccg
gaaattaaggtgttgaattccagccaggagaacgggaactgtagcctgatgctggcctgc
atggtggagaagggggaccatgtagcttacaactggagtgaggaggcgggcgcccccctg
ctgagccccaccaagaactcccacctcctgtatctcacccttggccctcaggatgccaac
aacatctacgtctgcaccgtgagcaaccccatcagcaatggctctcagaccttcatcccg
tggtccagatgcagcctcggttcctcaggtgagtgcccttgtggcggctag
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