Phocoena sinus (vaquita): 116759361
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Entry
116759361 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04924
Renin secretion
psiu04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04924 Renin secretion
116759361
09154 Digestive system
04972 Pancreatic secretion
116759361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116759361
Ion channels [BR:
psiu04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
116759361
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
MG2
Motif
Other DBs
NCBI-GeneID:
116759361
NCBI-ProteinID:
XP_032498968
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Position
1:77064104..77153948
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AA seq
1401 aa
AA seq
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MGLFRSSVFLLVLXLLQGSNTPLVRLNNNGYEGIVIAIDPAVPEHKXLTEQIKDMVTTAS
TYLHEATEKRFXFKNVSILIPENWKNKTQYKRPKPESYKHVDVLVTPPTLSGXDKLYTKQ
LTACEEKGEYIHFTPDFVLGKKYLKYFPTGRVFVHEWAHRRWGVFDEYNYDEPFYSAKSK
KCPIFRCSTDITGINRVYKCKENSCVTNRCKIDSKTKLYEKDCQFFPYKYQTEKTSIMFM
QGIDSIIEFCNEKNHNXESPSLQNKMCNFRSTWEVISNSENFKDTVPMVAAPPPPTFSLL
RISERIVCLVLDKSENMKVSFMGKFGQVLGGDTTDQSGDEARRKVWKIEENPPRPETDED
TQTNLESFTRTAPGGAFVVSNVSKHPLPDLYPPSQITDLEATPDGDEIRITWTAPGDDFD
VGKVQQYIIRISGSILDLRDNFDDALQVNTTDLLPNEANSKETFAFKPENISEENATHVF
ITIQSVDKSNLTSKVSNIAQVALFILQVDPSAGESHPNPRVHISTLVSFIVTCEKMVLTL
NVILFLTLHLLPGMKSSMVNLINNGYDGTVIAINPSVPEDEKLIQNIKEMVTEASTYLFH
ATKXRVYFRNVSILIPMTWKSKSEYLMPKQEAHDQADVIVANSYLKYGDDPHTLQHGKCG
EKGQYIHFTPNFLLTNNLPIYGSXGRVFVHEWAHLRWGIFDEYNVDQPFYISRRNTIEAT
RCSIHITGINVVFKKCQGGSCITRPCRRDSXTRLYEAKCIFIPEKSQTARESIMFMQSLH
SVTEFCTEKAHDTEAPNLQNKMCNGRTTWDVIMDSDDFQNISPTREMNLPTPPTFSLLKS
KQGVVCSLLDKSGSMNLEDCLFRMNQAAELHLIQVIKKGSLVGMVTFDSVAEIQNHLTKI
TDDNVYRNLPQADGGTSVCRGLKAEFQAVIYSNQSTSGSEIILLTDREDNEINLCFEEVK
QSGAIIHTIALGPSAAKELETLSDMTRGHHFYANKDINGLTNVFSRISSRSGSITQQAIQ
LESKALTITGRKWINGTVPMDSTIGNATFFVVTWTIQKPEILLQGPQGKKYKTSDFKEDK
LNIRSTWLRIPGIAETGTWTYSLLNNHASPQMQTVTVTTRARSPTTLPVIETGHXSQTTA
HYPNPLIVYAQVSQGFLPVLGINVTAIIETEDGHQVTLELWDNGAGTDTVKNDGIYSRYF
TDYHGSGRYSLKGHAQERNNMARLSLRQQQNKALYIPGYVENGKIIQNRPRPGVKGDVAK
AEMDFSRLTSRVSFTVSGAPPPGNHPHMFPPAKITDLEAKFKDLIQLSWTAPSNVLEKEN
ANRYIIRISKSFLDLREDFDNAALVNTSSLIPKEASSIENFEFKSEPLXENVTYIAVQII
NEANITSEVSNVAQVTLPLPP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggggttattcagaagttctgtcttcctcttagtcctatagctgctgcaggggtccaat
actccccttgttcggctgaataacaatggctatgagggcattgtcattgctatagaccct
gctgtgccagaacataaancactaactgaacagataaaggacatggtgactacagcttct
acttatctgcatgaagccaccgaaaaaaggtttntttttaaaaatgtatcaatattaatt
ccagagaactggaagaacaaaactcaatacaagaggccaaaacctgaaagctacaaacac
gttgatgttttagtcacaccacctaccctctcaggttgagataagctatatactaagcag
ctcactgcctgtgaagaaaaaggagaatacattcatttcacccctgactttgtacttgga
aaaaagtatttgaaatattttcccacaggaagagtgtttgtccatgagtgggcccatcgc
cgctggggagtgtttgatgagtacaattatgatgagcctttctacagcgctaagtcaaag
aaatgtcctattttcaggtgttctacagatattactggtataaatagagtttataagtgt
aaagaaaacagctgtgtaactaatagatgcaaaattgattctaagacaaaactgtatgaa
aaagattgtcagttcttcccttataaatatcaaactgaaaagacatccataatgtttatg
caaggtattgattcgatcattgaattctgtaatgaaaaaaaccataactgagaatctcca
agcctacaaaataaaatgtgcaatttcagaagcacttgggaggtgatcagcaattctgag
aattttaaagacactgtgcctatggtggcagcaccccctccacccaccttctcattgctg
aggatcagtgaaagaattgtgtgcttagttcttgataagtctgaaaacatgaaggtaagc
ttcatggggaaatttgggcaagtgttgggaggagataccacagatcagagcggtgatgag
gctagaagaaaagtgtggaaaattgaagagaatccaccaagacctgaaactgatgaggac
actcagacaaacttggagagtttcaccagaacagcacctggaggtgcatttgtggtttca
aatgtttcaaaacatcccttacctgacctctacccaccaagtcaaatcacagaccttgaa
gccacacctgatggggatgagatcagaataacatggacagcaccaggagatgattttgat
gttggaaaagttcaacagtatatcataagaataagtggaagcatcctggatctaagggat
aattttgatgatgcgctgcaagtaaacactactgatctgttaccaaacgaggccaactcc
aaggaaacctttgcattcaaaccagaaaatatctcagaagaaaatgcaactcacgttttc
attactattcaaagtgtggataaaagcaatttgacatcaaaagtatccaacattgcacaa
gtagctttgtttattcttcaagtagatcccagtgctggtgaaagtcatccaaatcccaga
gttcacatttctaccttggtatcgtttattgtaacatgcgaaaaaatggtgctcactctg
aatgttattctgttcctaactttgcatctcttgcctggaatgaaaagctcaatggtaaat
ttgattaacaatggatatgatggcactgtcattgcaattaaccccagtgtgccagaagat
gaaaaactcattcaaaacataaaggaaatggtaactgaagcttctacttacctgtttcat
gccaccaaatgaagagtttatttcaggaatgtaagcattttaattccaatgacctggaag
tcaaaatctgagtacttaatgccaaaacaagaagcacatgaccaggcagatgtcatagtt
gctaattcttacctaaaatatggagatgatccccatacacttcaacatggaaaatgtgga
gaaaaaggacaatatatacattttactccaaacttcttgttgactaataatttgcctatc
tatgggtcctgaggcagagtatttgtccatgagtgggcccatctccgatggggaatattt
gatgagtataatgtggaccagccattctatatttccagaagaaacactattgaagcaaca
agatgttcaattcatattactggtataaacgtggttttcaagaaatgccagggaggcagc
tgcataacaaggccatgcagacgtgactcatagacaaggctgtatgaagcaaaatgtata
ttcatcccagaaaaatcccagactgcaagggagtccattatgtttatgcaaagtctccat
tctgtgactgaattttgtacagaaaaagcacacgatacagaagctccaaacctacaaaac
aaaatgtgcaatggcagaaccacgtgggatgtaatcatggactctgatgactttcagaat
atatctcccacgagagaaatgaatctaccgactcctcctacattttcattactcaagtcc
aaacagggggtagtctgttcgttacttgataaatctggaagcatgaatttagaagactgt
ctctttcgaatgaatcaagcagcagaactacacttgattcaagttatcaaaaagggatcc
ttggttgggatggttacatttgacagtgttgctgaaatccaaaatcatctaacaaaaata
actgatgataatgtttaccgaaatctgcctcaagctgatggtggaacttcagtttgcagg
ggactcaaagcagaattccaggcagttatctacagtaaccaaagcacttctggttctgaa
atcatattactaactgatagggaagataatgaaataaacttatgctttgaggaggtaaaa
caaagtggtgcgatcatccacaccattgctctgggaccttctgctgccaaagaactggag
acactgtcagatatgacaagaggacatcatttttatgccaataaagacataaatggcctt
actaatgttttcagtagaatttcatctagaagtggcagcatcactcagcaggctattcag
ttggaaagcaaagccttgacaattacaggaaggaaatggataaatggtacagtgcctatg
gacagtacaattggaaatgccactttctttgttgtcacatggacaatacaaaagccagaa
attcttctccaaggtccacaaggaaagaaatataaaacctcagatttcaaagaagataag
ctaaatattcgatctacttggcttcgaataccaggtattgcagaaacaggtacttggact
tacagccttctaaataatcatgccagccctcaaatgcaaaccgtgacagtgactactcga
gcaagaagtcctactacactcccagtaattgaaacaggtcacnnaagtcaaactacagcc
cattaccctaacccactgattgtttatgcacaagtcagtcaagggtttttgcctgtactg
ggaatcaatgtaacagccattatagaaaccgaagatggacatcaagtaacattagagcta
tgggacaatggtgcaggtactgataccgtcaagaatgatggcatctactcaagatatttt
acagattatcatggaagcggtagatacagtttaaaaggacatgcccaggaaagaaacaac
atggctaggctaagtttaagacaacaacagaacaaagctctgtacataccaggctatgtt
gaaaatggtaaaattatacagaaccggcccagacctggagtcaaaggtgacgtggcaaaa
gctgaaatggactttagcagactaacctctagagtgtcgtttactgtatcaggagctcct
cctcctggtaatcaccctcacatgttcccacccgctaaaattacagaccttgaggctaag
tttaaagatcttattcaactttcatggacagcccctagcaatgtcctagaaaaagaaaac
gccaataggtacattataagaataagtaagagtttcctggatctccgagaagattttgac
aatgctgctttagtgaatacttctagtctaatacctaaggaggccagctcaatagaaaat
tttgaatttaagtcagaacctttantagaaaatgttacctatattgcagtccaaatcatc
aatgaagccaatatcacctcagaggtttctaatgttgcacaagtcacgctgcctctgccg
ccg
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