Phocoena sinus (vaquita): 116759464
Help
Entry
116759464 CDS
T07759
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116759464 (MKRN1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116759464 (MKRN1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116759464 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-C3HC4
zf-RING_UBOX
zf-CCCH_3
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116759464
NCBI-ProteinID:
XP_032499160
Ensembl:
ENSPSNG00000016640
UniProt:
A0A8C9CBN7
LinkDB
All DBs
Position
9:13620250..13649132
Genome browser
AA seq
482 aa
AA seq
DB search
MAEAAAPGTTATTSGARAAAAAVAAASPTPTPTVTSPSLGAGGGGGGSDGSSGGWTKQVT
CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKPLKQEEATAT
DLTAKSALAASSSLSSVVGPIVEVNMGEAEARNSNFSTVGAGSEDWVNAIEFVPGQPYCG
RTAPSSTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCG
LQVLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFG
ILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQK
YKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRCRAQRRNHFW
ELIEEREHGNPFDNDDEEVVTFELGEMLLMLLAAGGDDDLTDSEDEWDLFHDELEDFYDL
DL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcagctcccggaacaacagccacaacatcaggagcacgagcggcagcg
gcggcggtggcagcggcctcccccacccctacccccacagtcacctccccgtccctgggg
gcggggggcgggggaggcggcagcgacggcagcagcggcggctggactaaacaggtcacc
tgcaggtatttcatgcatggggtttgtaaggaaggagataactgtcgatactcacatgac
ctctctgacagtccatatggtgtagtgtgcaagtattttcagcgagggtactgtatttac
ggagaccgctgcagatatgaacacagcaagccattgaaacaggaagaagcaactgctaca
gatctaactgcaaagtcagcccttgctgcttcctcaagtctctcatcagtagttggaccg
attgttgaagtgaatatgggcgaagctgaggcaagaaattcaaacttttcaactgtagga
gcgggttcagaagactgggtgaacgccattgagtttgttcctgggcaaccctactgtggc
cgtactgccccttcctccactgaagcacccctgcagggctcagtgaccaaggaagaatca
gagaaggagcaaactgcagtggaaacaaagaagcagctctgcccctatgctgcggtggga
gagtgccgatatggggagaactgtgtgtatctccacggagactcgtgtgatatgtgtggg
ctgcaggtcctccatccaatggatgctgcccaaagatcacaacatataaaatcttgcatt
gaggcccatgagaaggacatggagctctcgtttgctgtgcagcgcagcaaggacatggtg
tgtgggatctgcatggaggtggtctatgaaaaagccaaccccagcgagcgccgcttcggg
atcctctccaactgcaaccacacctactgtctcaagtgtattcgcaagtggaggagtgct
aagcaatttgagagcaagatcataaagtcctgcccagaatgccgcatcacatctaacttt
gtcattccaagtgagtactgggtggaggagaaagaagagaagcagaaactcattcagaaa
tacaaggaggcaatgagcaacaaggcgtgcaggtattttgatgaaggacgcgggagctgt
ccatttggagggaactgtttttacaagcatgcgtaccctgatggccgtagagaggagcca
caaagacagaaagtgggaacatcaagcagatgccgggcccaacgaaggaaccacttctgg
gagctcattgaggaaagagagcacggcaaccccttcgacaacgacgacgaagaggttgtc
accttcgagctgggcgagatgttgcttatgcttttggctgcaggtggggacgacgacctg
acggactctgaagacgagtgggacttgtttcacgatgagctggaagatttttatgacttg
gatctatag
DBGET
integrated database retrieval system
