Phocoena sinus (vaquita): 116759491
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Entry
116759491 CDS
T07759
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu02010
ABC transporters
psiu04976
Bile secretion
psiu05206
MicroRNAs in cancer
psiu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116759491 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
116759491 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
116759491 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
116759491 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116759491 (ABCB1)
04147 Exosome [BR:
psiu04147
]
116759491 (ABCB1)
04090 CD molecules [BR:
psiu04090
]
116759491 (ABCB1)
Enzymes [BR:
psiu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116759491 (ABCB1)
Transporters [BR:
psiu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116759491 (ABCB1)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116759491 (ABCB1)
CD molecules [BR:
psiu04090
]
Proteins
116759491 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
RsgA_GTPase
Rad17
AAA
Zeta_toxin
AAA_5
AAA_14
AAA_29
SbcC_Walker_B
G-alpha
AAA_7
APS_kinase
AAA_30
PRK
DUF815
NTPase_1
AAA_15
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
116759491
NCBI-ProteinID:
XP_032499210
Ensembl:
ENSPSNG00000011212
UniProt:
A0A8C9C0Z0
LinkDB
All DBs
Position
9:76717465..76824417
Genome browser
AA seq
1284 aa
AA seq
DB search
MDLEEGRSGRAGGENFLKRDKKRFFSKKDEKKEKKPTVSTFAVFRYSSWLDKLYMVLGTV
AAIIHGTGLPLMMLVFGDMTDSFANAGSLGNLTISGLTNGSFMDSTYFGKKLEEEMTTYA
YYYSGIGAGVLVAAYIQVSFWCLAAGRQVYKIRKQFFHAIMRQEIGWFDMHDTGELNTRL
ADDVSKINEGIGDKIGIFFQSMATFFTGFTVGFTQGWKLTLVILAVSPVLGLSAAIWAKI
LSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITA
NISIGAAFLLIYASYALAFWYGTSLVLSEEYSVGQVLTVFFSVLIGAFSVGQASPSIEAF
ANARGAAYEIFKIIDNKPSIDSYSKNGRKPDNIKGNLEFRNVHFNYPSRNEVKILKGLNL
KVESGQTVALVGNSGCGKSTTVQLIQRLYDPTEGVISIDGQDIRTINVRYLREIIGVVSQ
EPVLFATTIAENIRYGRENVTMDEIEKAVKEASAYDFIMKLPNKFDTLVGERGAQLSGGQ
KQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNA
DVIAGLDDGVTVEKGSHDELMKEKGIYFKLVTMQTKGNEIELENAAGGSESEIDVLDMSP
KDLGSSLIRRKSTRKSIHGPQSQNRKLSTEETLDENVPPVSFWRILKLNITEWPYFVVGI
FCAIINGGLQPAFSVIFSKIVGVFTRDDDPETKRQNSNLFSLLFLILGIISFITFFLQGY
TFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLASDAAQVQGAIGSRLAV
LTQNIANLGTGIVISLIYGWQLTLLLLAIVPIIAVAGVIEMKMLSGQVLKDKKELEDAGK
IATEAIENFRTVVSLTREEKFEYMYALSLQVPYRNSLRKAHIFGITFSITQAMMYFSYAG
CFRFGAYLVAHGIMDFEDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSAAHVIMVIEKT
PVIDSYSTEGLKPNTVEGNVTFNEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCG
KSTVVQLLERFYDPLAGTVLIDGKEIKHLNVQWLRAHMGIVSQEPILFDCSIGENIAYGD
NSRVVSQEEIVQAAKEANIHPFVETLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPR
ILLLDEATSALDTESEKVVQEALDKAQEGRTCIVIAHRLSTIQNADLIVVFQNGKVKEHG
THQQLLAQRGIYFSMVSVQAGAKR
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaagaaggccgcagtggaagagcagggggggagaacttcttgaaaagggac
aagaaaaggtttttcagtaaaaaagatgagaagaaagaaaagaaaccaactgtcagtact
tttgcagtgttccgctattcgagttggcttgataagctgtatatggtgttggggactgtg
gccgccatcatccatggaaccggactccccctcatgatgctggtgtttggagacatgacg
gatagctttgcaaatgcaggaagtttaggaaacctaacgatttcaggattaactaatgga
agttttatggacagtacatatttcggcaaaaagctggaggaggaaatgaccacgtacgcc
tattattacagtggaatcggggctggcgtgcttgtcgccgcttacatccaggtttcattc
tggtgcctggcagcaggaagacaagtatacaaaattagaaaacagttttttcatgctatc
atgcggcaggagataggctggtttgacatgcatgacactggggagcttaacacccggctc
gcagatgacgtctccaaaattaatgaaggaattggtgacaaaattggaatattctttcag
tcaatggcaacattcttcaccggttttacagtaggatttacacaaggttggaagttaacc
cttgtgattttagccgtcagtcctgttcttggtctgtcagctgctatctgggcaaagata
ctatcttcatttactgataaagaactcttggcatatgcaaaagctggagcagtagctgaa
gaggtcttagcagcgattagaactgtgattgcatttggaggacaaaagaaagaacttgaa
aggtacaacaaaaatttggaagaagctaaaagaattggaataaagaaagctattacagcc
aacatttctataggtgctgctttcctgttgatctatgcatcatatgctctggcattctgg
tatgggacctccttagtcctgtcagaagaatattctgttggacaagtactcactgtcttc
ttttccgtattaattggggcttttagtgttggacaggcatctccaagcattgaggcattt
gcaaatgcaagaggagcagcttatgaaatctttaagatcattgataacaaaccaagcatc
gacagctattcgaagaacgggcgcaaacccgataatattaagggaaatctggaattcaga
aatgttcacttcaattacccatctcgaaacgaagttaagatcttgaagggcctcaacttg
aaggtagagagcgggcagacggtggcactggttggaaacagtggctgtgggaaaagcacg
acagtccagctgatacagaggctctatgaccccacggagggcgtgatcagtattgacgga
caggacatcaggaccatcaatgtaaggtatctgcgggaaattatcggtgtggtgagtcag
gaacctgtgttgtttgctaccaccatagccgagaacattcgctacggccgtgaaaatgta
accatggatgagattgagaaagctgtgaaggaagccagcgcctatgacttcatcatgaaa
ctgcctaataaatttgacaccctggttggcgagagaggggcccagctgagtggtggacag
aagcagagaatcgccatcgctcgggctctggttcgcaaccccaagatcctgctgctggat
gaggccacctcagcgctggacactgagagtgaagcggtggttcaggtggccctggataag
gccagagaaggccggaccaccattgtgatcgcacatcgtttgtccacagttcgtaatgct
gatgtcattgctggtcttgatgatggagtcactgtggagaaaggcagtcatgatgaactc
atgaaggagaaaggcatttacttcaaacttgtcacaatgcagacaaaaggaaatgaaatt
gaattagaaaatgcagctggtggatccgaaagtgaaattgatgtcttggacatgtccccc
aaagatttaggatccagtctaataagaagaaaatcaactcgcaagagtatccatggacca
caaagccaaaacagaaagcttagtacagaagagactttggatgaaaatgtacctccagtt
tctttttggaggattctgaagctgaacataactgaatggccttattttgtggttggtata
ttttgtgccattataaatggaggtctgcaaccagcattttcagtaatattttcaaagatt
gtaggggtttttaccagagatgacgatcctgaaaccaaacgacagaatagtaacttgttt
tcactcttgtttctaatccttggaattatttcttttattacgtttttccttcagggctac
acgtttggcaaggccggagagatcctcaccaagcgactccgatacatggttttcagatcc
atgctgagacaggatgtgagctggtttgacgaccctaaaaacaccacaggagccttgacg
accaggcttgccagtgatgctgctcaagttcaaggggctataggttccaggcttgctgta
cttacccagaatatagcaaatcttgggacaggcattgttatatccttaatctatggctgg
cagttaacacttttactgttagcaattgtacccatcattgcagtagcaggagttattgaa
atgaaaatgctgtctggacaagtactgaaagataagaaagaactagaagatgccgggaag
attgccacggaagcaatagaaaacttccgaactgttgtttctttgactcgggaggagaag
tttgaatatatgtatgccctgagtttgcaggtaccatacagaaactctctgaggaaagca
cacatctttggaatcacgttttccatcacccaggcaatgatgtacttttcttacgctggc
tgtttccgttttggcgcctacttggtggcacatggcatcatggactttgaggatgttctc
ttagttttctcagccattgtctttggcgcaatggctgtgggtcaggtcagttcatttgct
cctgactatgccaaggccaaagtgtcagcagcccacgtcatcatggtcattgaaaaaacc
cctgtgattgacagctacagcacggaaggcctaaagccgaatacagtggaaggaaatgtg
acatttaatgaagtcgtgttcaactatcccactcgaccagacatcccagtgcttcagggg
ctgagcctcgaggtgaagaagggccagacgctggccctggtgggcagcagcggctgtggg
aaaagcacggtggtccagctcctggagcggttctacgaccccttggctggaacagtgcta
attgacggcaaggaaataaagcacctgaatgtccagtggctccgagcacacatgggcatc
gtgtcccaggagcccatcctgtttgactgcagcatcggcgagaacatcgcctacggggac
aacagccgggtcgtgtcacaggaggagatcgtgcaggcagccaaggaggccaacatacac
cccttcgtcgagacgctgcctgataaatataacaccagagtaggagacaaaggaactcag
ctctctggtggccagaagcagcgcattgcgatagctcgtgccctcgttagacagcctcgt
atattgcttctggatgaagctacatcagctctggatacagaaagtgaaaaggttgtccaa
gaagccctggacaaagcccaagaagggcgcacctgtatcgtcatcgctcaccgcctgtcc
accattcagaatgcagacttgatagtggtgtttcagaacggcaaagtcaaggagcacggc
acacaccagcagctgctggcgcagagaggcatctacttctccatggtcagtgtccaggct
ggagcaaagcgctag
DBGET
integrated database retrieval system