KEGG   Phocoena sinus (vaquita): 116759491
Entry
116759491         CDS       T07759                                 
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu02010  ABC transporters
psiu04976  Bile secretion
psiu05206  MicroRNAs in cancer
psiu05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    116759491 (ABCB1)
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    116759491 (ABCB1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    116759491 (ABCB1)
  09162 Cancer: specific types
   05226 Gastric cancer
    116759491 (ABCB1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:psiu02000]
    116759491 (ABCB1)
   04147 Exosome [BR:psiu04147]
    116759491 (ABCB1)
   04090 CD molecules [BR:psiu04090]
    116759491 (ABCB1)
Enzymes [BR:psiu01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     116759491 (ABCB1)
Transporters [BR:psiu02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    116759491 (ABCB1)
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116759491 (ABCB1)
CD molecules [BR:psiu04090]
 Proteins
  116759491 (ABCB1)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_16 AAA_22 RsgA_GTPase Rad17 AAA Zeta_toxin AAA_5 AAA_14 AAA_29 SbcC_Walker_B G-alpha AAA_7 APS_kinase AAA_30 PRK DUF815 NTPase_1 AAA_15 DUF2207_C
Other DBs
NCBI-GeneID: 116759491
NCBI-ProteinID: XP_032499210
Ensembl: ENSPSNG00000011212
UniProt: A0A8C9C0Z0
LinkDB
Position
9:76717465..76824417
AA seq 1284 aa
MDLEEGRSGRAGGENFLKRDKKRFFSKKDEKKEKKPTVSTFAVFRYSSWLDKLYMVLGTV
AAIIHGTGLPLMMLVFGDMTDSFANAGSLGNLTISGLTNGSFMDSTYFGKKLEEEMTTYA
YYYSGIGAGVLVAAYIQVSFWCLAAGRQVYKIRKQFFHAIMRQEIGWFDMHDTGELNTRL
ADDVSKINEGIGDKIGIFFQSMATFFTGFTVGFTQGWKLTLVILAVSPVLGLSAAIWAKI
LSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITA
NISIGAAFLLIYASYALAFWYGTSLVLSEEYSVGQVLTVFFSVLIGAFSVGQASPSIEAF
ANARGAAYEIFKIIDNKPSIDSYSKNGRKPDNIKGNLEFRNVHFNYPSRNEVKILKGLNL
KVESGQTVALVGNSGCGKSTTVQLIQRLYDPTEGVISIDGQDIRTINVRYLREIIGVVSQ
EPVLFATTIAENIRYGRENVTMDEIEKAVKEASAYDFIMKLPNKFDTLVGERGAQLSGGQ
KQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNA
DVIAGLDDGVTVEKGSHDELMKEKGIYFKLVTMQTKGNEIELENAAGGSESEIDVLDMSP
KDLGSSLIRRKSTRKSIHGPQSQNRKLSTEETLDENVPPVSFWRILKLNITEWPYFVVGI
FCAIINGGLQPAFSVIFSKIVGVFTRDDDPETKRQNSNLFSLLFLILGIISFITFFLQGY
TFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLASDAAQVQGAIGSRLAV
LTQNIANLGTGIVISLIYGWQLTLLLLAIVPIIAVAGVIEMKMLSGQVLKDKKELEDAGK
IATEAIENFRTVVSLTREEKFEYMYALSLQVPYRNSLRKAHIFGITFSITQAMMYFSYAG
CFRFGAYLVAHGIMDFEDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSAAHVIMVIEKT
PVIDSYSTEGLKPNTVEGNVTFNEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCG
KSTVVQLLERFYDPLAGTVLIDGKEIKHLNVQWLRAHMGIVSQEPILFDCSIGENIAYGD
NSRVVSQEEIVQAAKEANIHPFVETLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPR
ILLLDEATSALDTESEKVVQEALDKAQEGRTCIVIAHRLSTIQNADLIVVFQNGKVKEHG
THQQLLAQRGIYFSMVSVQAGAKR
NT seq 3855 nt   +upstreamnt  +downstreamnt
atggatcttgaagaaggccgcagtggaagagcagggggggagaacttcttgaaaagggac
aagaaaaggtttttcagtaaaaaagatgagaagaaagaaaagaaaccaactgtcagtact
tttgcagtgttccgctattcgagttggcttgataagctgtatatggtgttggggactgtg
gccgccatcatccatggaaccggactccccctcatgatgctggtgtttggagacatgacg
gatagctttgcaaatgcaggaagtttaggaaacctaacgatttcaggattaactaatgga
agttttatggacagtacatatttcggcaaaaagctggaggaggaaatgaccacgtacgcc
tattattacagtggaatcggggctggcgtgcttgtcgccgcttacatccaggtttcattc
tggtgcctggcagcaggaagacaagtatacaaaattagaaaacagttttttcatgctatc
atgcggcaggagataggctggtttgacatgcatgacactggggagcttaacacccggctc
gcagatgacgtctccaaaattaatgaaggaattggtgacaaaattggaatattctttcag
tcaatggcaacattcttcaccggttttacagtaggatttacacaaggttggaagttaacc
cttgtgattttagccgtcagtcctgttcttggtctgtcagctgctatctgggcaaagata
ctatcttcatttactgataaagaactcttggcatatgcaaaagctggagcagtagctgaa
gaggtcttagcagcgattagaactgtgattgcatttggaggacaaaagaaagaacttgaa
aggtacaacaaaaatttggaagaagctaaaagaattggaataaagaaagctattacagcc
aacatttctataggtgctgctttcctgttgatctatgcatcatatgctctggcattctgg
tatgggacctccttagtcctgtcagaagaatattctgttggacaagtactcactgtcttc
ttttccgtattaattggggcttttagtgttggacaggcatctccaagcattgaggcattt
gcaaatgcaagaggagcagcttatgaaatctttaagatcattgataacaaaccaagcatc
gacagctattcgaagaacgggcgcaaacccgataatattaagggaaatctggaattcaga
aatgttcacttcaattacccatctcgaaacgaagttaagatcttgaagggcctcaacttg
aaggtagagagcgggcagacggtggcactggttggaaacagtggctgtgggaaaagcacg
acagtccagctgatacagaggctctatgaccccacggagggcgtgatcagtattgacgga
caggacatcaggaccatcaatgtaaggtatctgcgggaaattatcggtgtggtgagtcag
gaacctgtgttgtttgctaccaccatagccgagaacattcgctacggccgtgaaaatgta
accatggatgagattgagaaagctgtgaaggaagccagcgcctatgacttcatcatgaaa
ctgcctaataaatttgacaccctggttggcgagagaggggcccagctgagtggtggacag
aagcagagaatcgccatcgctcgggctctggttcgcaaccccaagatcctgctgctggat
gaggccacctcagcgctggacactgagagtgaagcggtggttcaggtggccctggataag
gccagagaaggccggaccaccattgtgatcgcacatcgtttgtccacagttcgtaatgct
gatgtcattgctggtcttgatgatggagtcactgtggagaaaggcagtcatgatgaactc
atgaaggagaaaggcatttacttcaaacttgtcacaatgcagacaaaaggaaatgaaatt
gaattagaaaatgcagctggtggatccgaaagtgaaattgatgtcttggacatgtccccc
aaagatttaggatccagtctaataagaagaaaatcaactcgcaagagtatccatggacca
caaagccaaaacagaaagcttagtacagaagagactttggatgaaaatgtacctccagtt
tctttttggaggattctgaagctgaacataactgaatggccttattttgtggttggtata
ttttgtgccattataaatggaggtctgcaaccagcattttcagtaatattttcaaagatt
gtaggggtttttaccagagatgacgatcctgaaaccaaacgacagaatagtaacttgttt
tcactcttgtttctaatccttggaattatttcttttattacgtttttccttcagggctac
acgtttggcaaggccggagagatcctcaccaagcgactccgatacatggttttcagatcc
atgctgagacaggatgtgagctggtttgacgaccctaaaaacaccacaggagccttgacg
accaggcttgccagtgatgctgctcaagttcaaggggctataggttccaggcttgctgta
cttacccagaatatagcaaatcttgggacaggcattgttatatccttaatctatggctgg
cagttaacacttttactgttagcaattgtacccatcattgcagtagcaggagttattgaa
atgaaaatgctgtctggacaagtactgaaagataagaaagaactagaagatgccgggaag
attgccacggaagcaatagaaaacttccgaactgttgtttctttgactcgggaggagaag
tttgaatatatgtatgccctgagtttgcaggtaccatacagaaactctctgaggaaagca
cacatctttggaatcacgttttccatcacccaggcaatgatgtacttttcttacgctggc
tgtttccgttttggcgcctacttggtggcacatggcatcatggactttgaggatgttctc
ttagttttctcagccattgtctttggcgcaatggctgtgggtcaggtcagttcatttgct
cctgactatgccaaggccaaagtgtcagcagcccacgtcatcatggtcattgaaaaaacc
cctgtgattgacagctacagcacggaaggcctaaagccgaatacagtggaaggaaatgtg
acatttaatgaagtcgtgttcaactatcccactcgaccagacatcccagtgcttcagggg
ctgagcctcgaggtgaagaagggccagacgctggccctggtgggcagcagcggctgtggg
aaaagcacggtggtccagctcctggagcggttctacgaccccttggctggaacagtgcta
attgacggcaaggaaataaagcacctgaatgtccagtggctccgagcacacatgggcatc
gtgtcccaggagcccatcctgtttgactgcagcatcggcgagaacatcgcctacggggac
aacagccgggtcgtgtcacaggaggagatcgtgcaggcagccaaggaggccaacatacac
cccttcgtcgagacgctgcctgataaatataacaccagagtaggagacaaaggaactcag
ctctctggtggccagaagcagcgcattgcgatagctcgtgccctcgttagacagcctcgt
atattgcttctggatgaagctacatcagctctggatacagaaagtgaaaaggttgtccaa
gaagccctggacaaagcccaagaagggcgcacctgtatcgtcatcgctcaccgcctgtcc
accattcagaatgcagacttgatagtggtgtttcagaacggcaaagtcaaggagcacggc
acacaccagcagctgctggcgcagagaggcatctacttctccatggtcagtgtccaggct
ggagcaaagcgctag

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