Phocoena sinus (vaquita): 116759578
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Entry
116759578 CDS
T07759
Symbol
SGCE
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04820
Cytoskeleton in muscle cells
psiu05410
Hypertrophic cardiomyopathy
psiu05412
Arrhythmogenic right ventricular cardiomyopathy
psiu05414
Dilated cardiomyopathy
psiu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116759578 (SGCE)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
116759578 (SGCE)
05412 Arrhythmogenic right ventricular cardiomyopathy
116759578 (SGCE)
05414 Dilated cardiomyopathy
116759578 (SGCE)
05416 Viral myocarditis
116759578 (SGCE)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Het-C
Motif
Other DBs
NCBI-GeneID:
116759578
NCBI-ProteinID:
XP_032499399
Ensembl:
ENSPSNG00000005246
UniProt:
A0A8C9BC93
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Position
9:complement(58552275..58620370)
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AA seq
473 aa
AA seq
DB search
MQLPWWWELGDPCAWTGQCRGTRRMSPATTGTFLLTAFLLSCADGISGTVNWKTKQANNF
IISRKMTAGKKDVYTIFSKVHSDRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDP
ITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTVIEITAYNRRTFETARH
NLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSA
LDRGGRVPLPINDMKEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRT
QFYIDWCKISLVDKTKQVSTYHEVIRGEGILPDGGEYKPPSDSLKSRDYYTDFLITLAVP
SAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQKSTKELRDMSKNREIAWPL
STLPVFHPVTGEIIPPLHADNYESTNMPLMQTQQNLPHQTQIPQQQTTGKWYP
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgccctggtggtgggagctgggagacccttgtgcttggacgggacagtgtcgg
gggacacgcaggatgagccccgcaaccactggcaccttcttgctgacagcttttttatta
agctgtgctgatggcataagtggaacagttaactggaagaccaaacaggccaacaatttt
attatcagcagaaaaatgactgctgggaagaaagatgtgtacactattttctccaaggtg
cactctgatcggaatgtctacccatctgcaggtgtcctctttgtacatgttttggaaaga
gagtattttaagggggaatttccaccttacccaaaacctggcgagattagtaatgatccc
ataacatttaacacaaatttaatgggttacccagaccggcctggatggcttcggtatatc
caaaggacaccatacagtgatggagtcctatatgggtctccaacggctgaaaatgtgggg
aaaccaacagtcattgagataactgcctacaataggcgtacctttgagactgcaaggcat
aatttgataattaatataatgtcagcagaagacttcccgttaccgtatcaagcagaattc
ttcattaaaaatatgaacgtagaagaaatgttggccagcgaggttctcggagactttctt
ggggccgtgaaaaatgtgtggcagccagagcgtctgaacgccataaacatcacgtcagct
ctagacaggggcggcagggttccgcttcccatcaatgacatgaaggagggcgtttatgtc
atggttggtgccgacgttccattttcttcttgtttacgagaagttgaaaatcctcagaat
caattgagatgcagtcaagaaatggagcctgtaataacgtgtgataaaaaatttcgtact
caattttacatcgactggtgcaaaatttcgttggttgataaaacaaagcaagtgtccacc
tatcacgaagtgattcgtggagaagggatcttacctgatggtggagaatacaaaccccct
tccgattctttgaaaagcagagactattacacggatttcctaattacactggctgtgccc
tcggcagtagcattggtcctttttctaatacttgcttatatcatgtgctgccgacgggaa
ggagtggaaaagagaaacatgcaaacaccagacatccaactggtccatcatagtgctatt
cagaaatctaccaaagaacttcgtgacatgtccaagaatagagagatagcatggcccctg
tcaacacttcctgtgtttcaccctgtgactggggaaatcatacctcctctacacgcagac
aattatgagagcactaatatgccattgatgcaaacacagcagaacttgccacatcagact
cagattccccaacagcagactacaggtaaatggtatccctga
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