Phocoena sinus (vaquita): 116759617
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Entry
116759617 CDS
T07759
Symbol
RBM28
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116759617 (RBM28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116759617 (RBM28)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116759617 (RBM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
ACOX_C_alpha1
Motif
Other DBs
NCBI-GeneID:
116759617
NCBI-ProteinID:
XP_032499487
Ensembl:
ENSPSNG00000019283
LinkDB
All DBs
Position
9:23799369..23830323
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AA seq
757 aa
AA seq
DB search
MAGLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQR
ALKEITTFEGCKITVTVAKKKLRNKSKEKGKTENSESPKKELQPKKAKVADKKARIIIRN
LSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKSMNMKEIK
GRTVAVDWAVAKDKYKNTQSASVAGEKKRPEPKCQELGQENGREEEDMEEEENDGGYDDE
EDDEEEEEDEENRESKLTKPVQTQKRAAKRAAPAESSEEEHSDDNSDLEERDRIDGGEDL
AQSDTNTEEQEEEVLKKKKKKRKLPSDVNEGKTVFIRNLSFDSEEEDLGELLQQFGDLKY
VRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAASPETESGGLKLDGRQLKVDLAVTRDEA
AKLRTKKVKKPTGTRNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKLKDQNIF
VSRTRLCLHNLPKAVDDKQLRKLLLNATRGEKGVRIKECRVMRGLKGAHGKIHGQSLGYA
FAEFQEHEHALAALRHINNNPEVFGPQKRPIVEFSLEDRRKLKIKELRIQRSLQKVKSMS
ATGEQPQQEQPELGKKQQQKTAQNHMHQQSKAPMEQKEKAGSVSWTGFQTKAEVEHVELS
DGKKRRKVLVLPSHRGPKIRLRDKGKMKPLPPKKPNPQINHWKQEKQKLSSKQVPRKKAK
GNKTEIRFNQLVEQYKQKLLGPSEGAPLAKRSKWFDS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctgaccctgtttgtgggccgcctcccgccctcggcccgcagcgagcagctg
gaggagctgttcagtcaggtggggccggtgaagcagtgcttcgtggtgactgagaaaggg
agtaaggcatgtcgaggctttggctatgtcactttttctatgctggaagatgttcagagg
gccctcaaggagattaccaccttcgaaggctgcaagatcactgtgactgttgccaagaaa
aaactgagaaataagtccaaggaaaaggggaaaactgaaaattcagagtccccaaagaag
gagctgcagcctaaaaaagccaaagtggcagataagaaagccagaataattatacggaac
ctgagctttaagtgttcagaagatgacttgaagacagtatttgctcagtttggagctgtc
ctggaagtaaacatccctaggaaaccagatggaaagatgcgtggttttgcttttgttcag
ttcaaaaacctcctagaagcaggaaaggctctcaaaagcatgaacatgaaagagataaaa
gggcggacagtggctgtggactgggctgtggcaaaggataaatataaaaatacacagtct
gcctctgtcgcaggtgagaagaagaggcctgaacctaaatgtcaggaattaggtcaagag
aatggcagggaagaagaggatatggaggaggaggagaatgatggtggttatgatgatgag
gaagatgatgaagaagaggaggaggacgaggagaatagagagtcgaagctgaccaagcct
gtgcaaactcagaagagagcagccaagagggcagcacctgcagaaagcagtgaagaggag
cattctgatgacaacagcgacctggaggaaagagacaggatcgatggtggagaggacctg
gctcagagtgataccaacactgaagagcaagaggaggaagtcttgaaaaagaagaagaag
aagaggaaattaccctctgatgtgaatgaagggaaaactgtctttatcagaaacctgtcc
ttcgactcagaggaagaagaccttggagagctcctccagcagtttggagatcttaaatat
gtccgcattgtcttgcatccagacacagagcattctaaaggttgtgcatttgcccagttc
atgactcaagaagcggctcagaaatgccttgaagctgcttctccagagaccgagagtggt
gggcttaaactggatggccggcagcttaaggttgacttggcagtgacccgtgatgaggct
gcaaagctccggacaaagaaggtgaagaagccgactgggacccggaacctctatctggcc
cgagaaggcttgattcgtgctgggacgaaggctgcagagggtgtgagtgctgctgatatg
gccaaaagagaacgatttgagctgctgaagcatcagaaactcaaggaccagaatatcttt
gtctcccggaccaggctgtgcctgcacaatctcccaaaggccgtggatgacaaacagctc
agaaagctgctgctgaatgccactagaggggagaagggggtgcgcatcaaggagtgtcgg
gtaatgcgaggccttaaaggagctcatgggaaaattcacggtcagtccttgggctacgcc
tttgcagagttccaggagcacgagcatgccctggcggccctgcgccacatcaacaacaat
ccagaagtctttggacctcagaagagaccaatagtggagttctctttggaagatcgaagg
aaacttaaaataaaggaactgaggatccagcgcagcctgcaaaaagtgaaatccatgtcg
gcaactggtgagcagccccagcaagaacaaccagagcttgggaaaaaacagcaacagaaa
acagctcagaaccacatgcatcaacaaagcaaggcacccatggagcagaaggagaaggca
ggatctgtctcgtggacagggttccagaccaaggccgaagtggagcacgtggagctgtct
gatgggaagaagcgaagaaaggtcctggtgctcccctcacaccgaggccccaaaattagg
ttacgggacaaaggcaaaatgaagcctctccctcccaagaagccaaacccccagataaac
cactggaagcaagagaagcagaaattatcttccaagcaggtacctaggaagaaagctaag
ggaaataagacagaaattcgcttcaaccagctggtcgaacaatataagcagaagttattg
ggaccttctgaaggagctcctcttgcaaagaggagcaaatggtttgacagttga
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